ncRNA ID | novel_zma_miR3013 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr6:73559335-73559436 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089714 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GCUCCACGCGGAUCGUCCGGUGAA - 24 |
Stem-loop(if miRNA) |
--   --    G     C        AAU     -A  -A    -  -A      C   GCU  CCAC CGGAU GUCCGGUG   UAUAG  CG  UGAA GU  UGUUUU C   |||  |||| ||||| ||||||||   |||||  ||  |||| ||  ||||||   CGG  GGUG GUCUG CAGGCUAC   GUAUC  GU  ACUU CA  ACAAGA C CA   UG    -     U        ---     GG  AG    U  CG      G |
Stem-loop sequence | GCUCCACGCGGAUCGUCCGGUGAAUUAUAGACGAUGAAGUAUGUUUUCCCGAGAACAGCACUUUCAGAUGGGCUAUGCAUCGGACUGUCUGGUGGGUGGCAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NM_001196965.1 |
|
3.0 | Zea mays U-box domain-containing protein 44 (LOC100502487), mRNA | NA | coding protein | psRNATarget | |||||||||
BT088331.1 |
|
3.0 | Zea mays full-length cDNA clone ZM_BFc0143H07 mRNA, complete cds | NA | coding protein | psRNATarget |