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BaseInfo

ncRNA ID osa-miR5155
Species Oryza sativa
Class miRNA
Genome position Chr8:9179446-9179632 [-]
Reference genome MSU7
Source miRBase
Length 24
Mature sequence(if miRNA) 152 - ACUUUAAUACCAUUGGAAGAUUGC - 175
Stem-loop(if miRNA)     C                            U    CAUUUAAGUUUCUUUUUU    -   CUGUGGUUUUUUGCAUGAAAAAAAAGAAAGAACAGG
AGUU CUGGUACACUUUAAUACCAUUGGAAGAU GCAC                  UUUG UUA                                    U
|||| |||||||||||||||||||||||||||| ||||                  |||| |||                                    A
UCGA GACUAUGUGAAAUUAUGGUGGCUUUCUA UGUG                  UAUC ACC                                    A
    A                            U    ---------------UUG    A   AAUGGUAGGGUAGGUGAAUAGAUAAUGACAAAUCGU
Stem-loop sequence AGUUCCUGGUACACUUUAAUACCAUUGGAAGAUUGCACCAUUUAAGUUUCUUUUUUUUUGUUACUGUGGUUUUUUGCAUGAAAAAAAAGAAAGAACAGGUAAUGCUAAACAGUAAUAGAUAAGUGGAUGGGAUGGUAACCAACUAUGUUGUGUUAUCUUUCGGUGGUAUUAAAGUGUAUCAGAAGCU

Reference

1 PMID:21525786
"Genome-wide discovery and analysis of microRNAs and other small RNAs from rice embryogenic callus";
Chen CJ, liu Q, Zhang YC, Qu LH, Chen YQ, Gautheret D;
RNA Biol. 8:538-547(2011).