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BaseInfo

ncRNA ID	novel_zma_miR2993
Species	Zea mays
Class	miRNA
Genome position	Chr6:18167015-18167149 [+]
Reference genome	RefGen_v4
Source	SRR2089714;SRR5451004;SRR2089705;SRR2089707
Length	24
Mature sequence(if miRNA)	112 - GGGAUUAACCGAACAAGGCCUAAG - 135
Stem-loop(if miRNA)	--A   G             C    -AAU  A         AG         -UU     UAAAU  UCA    AGG CUUGUUCGGUUAG UCUC    CC UGUGGAUUG  UGGGAUUGG   GGGUU     AG   A    ||| ||||||||||||| ||||    || |||||||||  |||||||||   |||||     ||    UCC GAACAAGCCAAUU AGGG    GG AUACCUAAC  GCCCUAACC   UUUAA     UC   A GAA   G             -    CAAU  -         CU         UUU     -UACU  UUU
Stem-loop sequence	AAGGGCUUGUUCGGUUAGCUCUCAAUCCAUGUGGAUUGAGUGGGAUUGGUUGGGUUUAAAUAGUCAAAUUUCUUCAUAAUUUUUUCCAAUCCCGUCCAAUCCAUAGGUAACGGGAUUAACCGAACAAGGCCUAAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU962625.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   |||||||||||||||||||||||= targets:516   CUUAGGCCUUGUUCGGUUAAUCCU   539 Target Full Sequence	1.0	Zea mays clone 244290 mRNA sequence	NA	coding protein	psRNATarget
EZ064093.1	ncRNA:24   GAAU-CCGGAACAAGCCAAUUAGGG   1   ||||-|||||||||||||||||||| targets:96   CUUAAGGCCUUGUUCGGUUAAUCCC   120 Target Full Sequence	0.0	TSA: Zea mays contig65216, mRNA sequence	NA	coding protein	psRNATarget
XM_008672285.2	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   =||||||=|||||||||||||||= targets:1053   UUUAGGCUUUGUUCGGUUAAUCCU   1076 Target Full Sequence	2.0	PREDICTED: Zea mays 5-formyltetrahydrofolate cyclo-ligase, mitochondrial (LOC103647771), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008672284.2	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   =||||||=|||||||||||||||= targets:1111   UUUAGGCUUUGUUCGGUUAAUCCU   1134 Target Full Sequence	2.0	PREDICTED: Zea mays 5-formyltetrahydrofolate cyclo-ligase, mitochondrial (LOC103647771), transcript variant X2, mRNA	NA	coding protein	psRNATarget
JB163466.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   =||||||||||||||||||*|||| targets:7   UUUAGGCCUUGUUCGGUUAUUCCC   30 Target Full Sequence	1.5	Sequence 1130 from Patent EP2559767	NA	coding protein	psRNATarget
HI403005.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   =||||||||||||||||||*|||| targets:7   UUUAGGCCUUGUUCGGUUAUUCCC   30 Target Full Sequence	1.5	Sequence 1130 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235220.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   =||||||||||||||||||*|||| targets:7   UUUAGGCCUUGUUCGGUUAUUCCC   30 Target Full Sequence	1.5	Sequence 1215 from Patent EP2985353	NA	coding protein	psRNATarget
HI403090.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   =||||||||||||||||||*|||| targets:7   UUUAGGCCUUGUUCGGUUAUUCCC   30 Target Full Sequence	1.5	Sequence 1215 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235135.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   =||||||||||||||||||*|||| targets:7   UUUAGGCCUUGUUCGGUUAUUCCC   30 Target Full Sequence	1.5	Sequence 1130 from Patent EP2985353	NA	coding protein	psRNATarget
JB163551.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   =||||||||||||||||||*|||| targets:7   UUUAGGCCUUGUUCGGUUAUUCCC   30 Target Full Sequence	1.5	Sequence 1215 from Patent EP2559767	NA	coding protein	psRNATarget
AY104167.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   =||||||||||||||||||*|||| targets:1389   UUUAGGCCUUGUUCGGUUAUUCCC   1412 Target Full Sequence	1.5	Zea mays PCO062696 mRNA sequence	NA	coding protein	psRNATarget
BT043378.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   =||||||||||||||||||*|||| targets:1375   UUUAGGCCUUGUUCGGUUAUUCCC   1398 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0174B12 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001148918.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   =||||||||||||||||||*|||| targets:1375   UUUAGGCCUUGUUCGGUUAUUCCC   1398 Target Full Sequence	1.5	Zea mays nodulation homolog 1 (znod1), mRNA	NA	coding protein	psRNATarget
HI403020.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   *||||||||||||||||||*|||| targets:7   GUUAGGCCUUGUUCGGUUAUUCCC   30 Target Full Sequence	1.5	Sequence 1145 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235150.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   *||||||||||||||||||*|||| targets:7   GUUAGGCCUUGUUCGGUUAUUCCC   30 Target Full Sequence	1.5	Sequence 1145 from Patent EP2985353	NA	coding protein	psRNATarget
JB163481.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   *||||||||||||||||||*|||| targets:7   GUUAGGCCUUGUUCGGUUAUUCCC   30 Target Full Sequence	1.5	Sequence 1145 from Patent EP2559767	NA	coding protein	psRNATarget
BT086633.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   *|*||||||||||||||||||||| targets:364   AUAAGGCCUUGUUCGGUUAAUCCC   387 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFa0068P14 mRNA, complete cds	NA	coding protein	psRNATarget
BT063416.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   *|*||||||||||||||||||||| targets:1989   AUAAGGCCUUGUUCGGUUAAUCCC   2012 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFc0061L20 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001154362.2	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   *|*||||||||||||||||||||| targets:2061   AUAAGGCCUUGUUCGGUUAAUCCC   2084 Target Full Sequence	0.0	Zea mays protein kinase domain containing protein (LOC100281444), mRNA	NA	coding protein	psRNATarget
EU956718.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   *|*||||||||||||||||||||| targets:2062   AUAAGGCCUUGUUCGGUUAAUCCC   2085 Target Full Sequence	0.0	Zea mays clone 1571610 protein kinase domain containing protein mRNA, complete cds	NA	coding protein	psRNATarget
XM_008674604.2	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   *|*||||||||||||||||||||| targets:2190   AUAAGGCCUUGUUCGGUUAAUCCC   2213 Target Full Sequence	0.0	PREDICTED: Zea mays protein kinase domain containing protein (LOC100281444), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020549704.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   *|*||||||||||||||||||||| targets:2197   AUAAGGCCUUGUUCGGUUAAUCCC   2220 Target Full Sequence	0.0	PREDICTED: Zea mays protein kinase domain containing protein (LOC100281444), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020549703.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   *|*||||||||||||||||||||| targets:2257   AUAAGGCCUUGUUCGGUUAAUCCC   2280 Target Full Sequence	0.0	PREDICTED: Zea mays protein kinase domain containing protein (LOC100281444), transcript variant X1, mRNA	NA	coding protein	psRNATarget
LQ235224.1	ncRNA:24   GA-AUCCGGAACAAGCCAAUUAGGG   1   ||-|||||||||||||||||*|||| targets:6   CUCUAGGCCUUGUUCGGUUAUUCCC   30 Target Full Sequence	1.5	Sequence 1219 from Patent EP2985353	NA	coding protein	psRNATarget
HI403094.1	ncRNA:24   GA-AUCCGGAACAAGCCAAUUAGGG   1   ||-|||||||||||||||||*|||| targets:6   CUCUAGGCCUUGUUCGGUUAUUCCC   30 Target Full Sequence	1.5	Sequence 1219 from Patent EP2074227	NA	coding protein	psRNATarget
JB163555.1	ncRNA:24   GA-AUCCGGAACAAGCCAAUUAGGG   1   ||-|||||||||||||||||*|||| targets:6   CUCUAGGCCUUGUUCGGUUAUUCCC   30 Target Full Sequence	1.5	Sequence 1219 from Patent EP2559767	NA	coding protein	psRNATarget
EU948922.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   *||||||||||||||||||*|||= targets:6   AUUAGGCCUUGUUCGGUUAUUCCU   29 Target Full Sequence	2.5	Zea mays clone 390151 mRNA sequence	NA	coding protein	psRNATarget
BT041767.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   *||||||||||||||||||*|||= targets:506   AUUAGGCCUUGUUCGGUUAUUCCU   529 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0049O10 mRNA, complete cds	NA	coding protein	psRNATarget
EU967549.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   *||||||||||||||||||*|||= targets:577   AUUAGGCCUUGUUCGGUUAUUCCU   600 Target Full Sequence	2.5	Zea mays clone 304376 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
EU942657.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   ||*||||||||||||||||*|||| targets:147   CUAAGGCCUUGUUCGGUUAUUCCC   170 Target Full Sequence	1.5	Zea mays clone 1527578 mRNA sequence	NA	coding protein	psRNATarget
EU951439.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   ||||||*|||||||*||||||||| targets:90   CUUAGGGCUUGUUCAGUUAAUCCC   113 Target Full Sequence	2.5	Zea mays clone 701891 mRNA sequence	NA	coding protein	psRNATarget
EU951448.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   ||||||*||||||||||||*|||| targets:654   CUUAGGGCUUGUUCGGUUAUUCCC   677 Target Full Sequence	2.5	Zea mays clone 701961 mRNA sequence	NA	coding protein	psRNATarget
EU949831.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   ||*||||||||||||||||*|||| targets:925   CUAAGGCCUUGUUCGGUUAUUCCC   948 Target Full Sequence	1.5	Zea mays clone 447574 mRNA sequence	NA	coding protein	psRNATarget
BT088232.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   ||*||||||||||||||||*|||| targets:1439   CUAAGGCCUUGUUCGGUUAUUCCC   1462 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0086F14 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001279968.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   ||*||||||||||||||||*|||| targets:1439   CUAAGGCCUUGUUCGGUUAUUCCC   1462 Target Full Sequence	1.5	Zea mays putative methyltransferase PMT15 (LOC101027245), mRNA	NA	coding protein	psRNATarget
XM_008679547.2	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   ||*||||||||||||||||*|||| targets:2409   CUAAGGCCUUGUUCGGUUAUUCCC   2432 Target Full Sequence	1.5	PREDICTED: Zea mays putative methyltransferase PMT15 (LOC101027245), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008666493.2	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   ||*||||||||||||||||*|||| targets:3392   CUAAGGCCUUGUUCGGUUAUUCCC   3415 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103643333 (LOC103643333), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020546709.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   ||*||||||||||||||||*|||| targets:3378   CUAAGGCCUUGUUCGGUUAUUCCC   3401 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103643333 (LOC103643333), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_008674024.2	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   ||||||*||||||||||||*|||| targets:3796   CUUAGGGCUUGUUCGGUUAUUCCC   3819 Target Full Sequence	2.5	PREDICTED: Zea mays S-adenosyl-L-methionine-dependent methyltransferase superfamily protein (LOC100216669), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008674023.2	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   ||||||*||||||||||||*|||| targets:3810   CUUAGGGCUUGUUCGGUUAUUCCC   3833 Target Full Sequence	2.5	PREDICTED: Zea mays S-adenosyl-L-methionine-dependent methyltransferase superfamily protein (LOC100216669), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008674025.2	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   ||||||*||||||||||||*|||| targets:3928   CUUAGGGCUUGUUCGGUUAUUCCC   3951 Target Full Sequence	2.5	PREDICTED: Zea mays S-adenosyl-L-methionine-dependent methyltransferase superfamily protein (LOC100216669), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_008674021.2	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   ||||||*||||||||||||*|||| targets:3943   CUUAGGGCUUGUUCGGUUAUUCCC   3966 Target Full Sequence	2.5	PREDICTED: Zea mays S-adenosyl-L-methionine-dependent methyltransferase superfamily protein (LOC100216669), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008666491.2	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   ||*||||||||||||||||*|||| targets:3660   CUAAGGCCUUGUUCGGUUAUUCCC   3683 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103643333 (LOC103643333), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008666492.2	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   ||*||||||||||||||||*|||| targets:3665   CUAAGGCCUUGUUCGGUUAUUCCC   3688 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103643333 (LOC103643333), transcript variant X2, mRNA	NA	coding protein	psRNATarget
EU949641.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   =|||||*||||||||||||*|||| targets:363   UUUAGGGCUUGUUCGGUUAUUCCC   386 Target Full Sequence	2.5	Zea mays clone 438540 mRNA sequence	NA	coding protein	psRNATarget
EU951101.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   =|||||*||||||||||||*|||| targets:620   UUUAGGGCUUGUUCGGUUAUUCCC   643 Target Full Sequence	2.5	Zea mays clone 687881 mRNA sequence	NA	coding protein	psRNATarget
XM_020541449.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   =|||||*||||||||||||*|||| targets:2709   UUUAGGGCUUGUUCGGUUAUUCCC   2732 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103634414 (LOC103634414), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020541448.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   =|||||*||||||||||||*|||| targets:2813   UUUAGGGCUUGUUCGGUUAUUCCC   2836 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103634414 (LOC103634414), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020549843.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   =|||||*||||||||||||*|||| targets:990   UUUAGGGCUUGUUCGGUUAUUCCC   1013 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100381972 (LOC100381972), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020549841.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   =|||||*||||||||||||*|||| targets:1108   UUUAGGGCUUGUUCGGUUAUUCCC   1131 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100381972 (LOC100381972), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020549842.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   =|||||*||||||||||||*|||| targets:1108   UUUAGGGCUUGUUCGGUUAUUCCC   1131 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100381972 (LOC100381972), transcript variant X2, mRNA	NA	coding protein	psRNATarget
EZ100118.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   *|||||*||||||||||||*|||| targets:24   AUUAGGGCUUGUUCGGUUAUUCCC   47 Target Full Sequence	2.5	TSA: Zea mays contig35773, mRNA sequence	NA	coding protein	psRNATarget
LQ235173.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   *|*||||||||||||||||*|||| targets:7   AUGAGGCCUUGUUCGGUUAUUCCC   30 Target Full Sequence	1.5	Sequence 1168 from Patent EP2985353	NA	coding protein	psRNATarget
HI403019.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   *|*||||||||||||||||*|||| targets:7   AUAAGGCCUUGUUCGGUUAUUCCC   30 Target Full Sequence	1.5	Sequence 1144 from Patent EP2074227	NA	coding protein	psRNATarget
JB163480.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   *|*||||||||||||||||*|||| targets:7   AUAAGGCCUUGUUCGGUUAUUCCC   30 Target Full Sequence	1.5	Sequence 1144 from Patent EP2559767	NA	coding protein	psRNATarget
HI403043.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   *|*||||||||||||||||*|||| targets:7   AUGAGGCCUUGUUCGGUUAUUCCC   30 Target Full Sequence	1.5	Sequence 1168 from Patent EP2074227	NA	coding protein	psRNATarget
JB163504.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   *|*||||||||||||||||*|||| targets:7   AUGAGGCCUUGUUCGGUUAUUCCC   30 Target Full Sequence	1.5	Sequence 1168 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235149.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   *|*||||||||||||||||*|||| targets:7   AUAAGGCCUUGUUCGGUUAUUCCC   30 Target Full Sequence	1.5	Sequence 1144 from Patent EP2985353	NA	coding protein	psRNATarget
AY103719.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   *|||||*||||||||||||*|||| targets:787   AUUAGGGCUUGUUCGGUUAUUCCC   810 Target Full Sequence	2.5	Zea mays PCO137008 mRNA sequence	NA	coding protein	psRNATarget
XM_008671671.2	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   *|*||*|||||||||||||||||| targets:1515   AUAAGACCUUGUUCGGUUAAUCCC   1538 Target Full Sequence	1.0	PREDICTED: Zea mays cytochrome c-type biogenesis ccda-like chloroplastic protein 2 (LOC103647117), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008671669.2	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   *|*||*|||||||||||||||||| targets:1539   AUAAGACCUUGUUCGGUUAAUCCC   1562 Target Full Sequence	1.0	PREDICTED: Zea mays cytochrome c-type biogenesis ccda-like chloroplastic protein 2 (LOC103647117), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008671670.2	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   *|*||*|||||||||||||||||| targets:1586   AUAAGACCUUGUUCGGUUAAUCCC   1609 Target Full Sequence	1.0	PREDICTED: Zea mays cytochrome c-type biogenesis ccda-like chloroplastic protein 2 (LOC103647117), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008671674.2	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   *|*||*|||||||||||||||||| targets:1671   AUAAGACCUUGUUCGGUUAAUCCC   1694 Target Full Sequence	1.0	PREDICTED: Zea mays cytochrome c-type biogenesis ccda-like chloroplastic protein 2 (LOC103647117), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_020553538.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   *|||||*||||||||||||*|||| targets:1795   GUUAGGGCUUGUUCGGUUAUUCCC   1818 Target Full Sequence	2.5	PREDICTED: Zea mays Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform (LOC100383610), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008645867.2	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   *|||||*||||||||||||*|||| targets:1861   GUUAGGGCUUGUUCGGUUAUUCCC   1884 Target Full Sequence	2.5	PREDICTED: Zea mays Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform (LOC100383610), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008657579.2	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   *|*||||||||||||||||*|||| targets:7054   AUAAGGCCUUGUUCGGUUAUUCCC   7077 Target Full Sequence	1.5	PREDICTED: Zea mays acyl-coenzyme A thioesterase 13 (LOC103635012), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_008657578.2	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   *|*||||||||||||||||*|||| targets:7158   AUAAGGCCUUGUUCGGUUAUUCCC   7181 Target Full Sequence	1.5	PREDICTED: Zea mays acyl-coenzyme A thioesterase 13 (LOC103635012), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020542399.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   *|*||||||||||||||||*|||| targets:7169   AUAAGGCCUUGUUCGGUUAUUCCC   7192 Target Full Sequence	1.5	PREDICTED: Zea mays acyl-coenzyme A thioesterase 13 (LOC103635012), transcript variant X3, mRNA	NA	coding protein	psRNATarget
BT040331.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   =|||*||||||||||||||*|||= targets:1707   UUUAUGCCUUGUUCGGUUAUUCCU   1730 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0083E04 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001157801.2	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   =|||*||||||||||||||*|||= targets:1744   UUUAUGCCUUGUUCGGUUAUUCCU   1767 Target Full Sequence	2.5	Zea mays Flavonoid 3-monooxygenase (LOC100273153), mRNA	NA	coding protein	psRNATarget
NM_001176594.1	ncRNA:24   GAAU-CCGGAACAAGCCAAUUAGGG   1   ||||-||*||||||||||||*|||| targets:1036   CUUAAGGGCUUGUUCGGUUAUUCCC   1060 Target Full Sequence	2.5	Zea mays uncharacterized LOC100383981 (LOC100383981), mRNA	NA	coding protein	psRNATarget
BT068797.1	ncRNA:24   GAAU-CCGGAACAAGCCAAUUAGGG   1   ||||-||*||||||||||||*|||| targets:1036   CUUAAGGGCUUGUUCGGUUAUUCCC   1060 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0382L20 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008645912.2	ncRNA:24   GAAU-CCGGAACAAGCCAAUUAGGG   1   ||||-||*||||||||||||*|||| targets:1527   CUUAAGGGCUUGUUCGGUUAUUCCC   1551 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100383981 (LOC100383981), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT018903.1	ncRNA:24   GAAU-CCGGAACAAGCCAAUUAGGG   1   ||||-||*||||||||||||*|||| targets:1937   CUUAAGGGCUUGUUCGGUUAUUCCC   1961 Target Full Sequence	2.5	Zea mays clone EL01T0208C03.d mRNA sequence	NA	coding protein	psRNATarget
XM_008674362.2	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   *|*||||||||||||||||*|||= targets:470   GUAAGGCCUUGUUCGGUUAUUCCU   493 Target Full Sequence	2.5	PREDICTED: Zea mays Membrane magnesium transporter (LOC100276290), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EU975230.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   *|*||||||||||||||||*|||= targets:475   GUAAGGCCUUGUUCGGUUAUUCCU   498 Target Full Sequence	2.5	Zea mays clone 485079 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
EU973494.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   *|*||||||||||||||||*|||= targets:487   GUAAGGCCUUGUUCGGUUAUUCCU   510 Target Full Sequence	2.5	Zea mays clone 399694 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001291558.2	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   *|*||||||||||||||||*|||= targets:611   GUAAGGCCUUGUUCGGUUAUUCCU   634 Target Full Sequence	2.5	Zea mays Membrane magnesium transporter (LOC100276290), mRNA	NA	coding protein	psRNATarget
EU964394.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   *|*||||||||||||||||*|||= targets:612   GUAAGGCCUUGUUCGGUUAUUCCU   635 Target Full Sequence	2.5	Zea mays clone 278539 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
EU976922.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   *|*||||||||||||||||*|||= targets:648   GUAAGGCCUUGUUCGGUUAUUCCU   671 Target Full Sequence	2.5	Zea mays clone 993749 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001112112.2	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   *|*||||=|||||||||||*|||| targets:1698   AUAAGGCUUUGUUCGGUUAUUCCC   1721 Target Full Sequence	2.5	Zea mays nitrilase 1 (NIT1), transcript variant 1, mRNA	NA	coding protein	psRNATarget
AY156979.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   *|*||||=|||||||||||*|||| targets:1706   AUAAGGCUUUGUUCGGUUAUUCCC   1729 Target Full Sequence	2.5	Zea mays nitrilase 1 (NIT1) mRNA, complete cds	NA	coding protein	psRNATarget
XM_008646066.2	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   *|*||||=|||||||||||*|||| targets:1739   AUAAGGCUUUGUUCGGUUAUUCCC   1762 Target Full Sequence	2.5	PREDICTED: Zea mays nitrilase 1 (NIT1), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_020537588.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   *|*||||=|||||||||||*|||| targets:1758   AUAAGGCUUUGUUCGGUUAUUCCC   1781 Target Full Sequence	2.5	PREDICTED: Zea mays nitrilase 1 (NIT1), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_008646063.2	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   *|*||||=|||||||||||*|||| targets:1776   AUAAGGCUUUGUUCGGUUAUUCCC   1799 Target Full Sequence	2.5	PREDICTED: Zea mays nitrilase 1 (NIT1), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_008646064.2	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   *|*||||=|||||||||||*|||| targets:1807   AUAAGGCUUUGUUCGGUUAUUCCC   1830 Target Full Sequence	2.5	PREDICTED: Zea mays nitrilase 1 (NIT1), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020537587.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   *|*||||=|||||||||||*|||| targets:1825   AUAAGGCUUUGUUCGGUUAUUCCC   1848 Target Full Sequence	2.5	PREDICTED: Zea mays nitrilase 1 (NIT1), transcript variant X3, mRNA	NA	coding protein	psRNATarget
BT066963.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   *|*||||=|||||||||||*|||| targets:3088   AUAAGGCUUUGUUCGGUUAUUCCC   3111 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0126L13 mRNA, complete cds	NA	coding protein	psRNATarget
EZ064016.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   ||*|||*||||||||||||*|||| targets:28   CUCAGGGCUUGUUCGGUUAUUCCC   51 Target Full Sequence	2.5	TSA: Zea mays contig65139, mRNA sequence	NA	coding protein	psRNATarget
EU942557.1	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   ||*|||*||||||||||||*|||| targets:476   CUAAGGGCUUGUUCGGUUAUUCCC   499 Target Full Sequence	2.5	Zea mays clone 1517970 mRNA sequence	NA	coding protein	psRNATarget
BT062183.2	ncRNA:24   GAAUCCGGAACAAGCCAAUUAGGG   1   ||*|||*||||||||||||*|||| targets:155   CUAAGGGCUUGUUCGGUUAUUCCC   178 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0224O15 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008659614.2	ncRNA:24   GAAU-CCGGAACAAGCCAAUUAGGG   1   =|||-||*||||||||||||*|||| targets:93   UUUAAGGGCUUGUUCGGUUAUUCCC   117 Target Full Sequence	2.5	PREDICTED: Zea mays mitogen-activated protein kinase kinase kinase A (LOC103637414), mRNA	NA	coding protein	psRNATarget