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BaseInfo

ncRNA ID	novel_zma_miR2987
Species	Zea mays
Class	miRNA
Genome position	Chr6:74657834-74658005 [-]
Reference genome	RefGen_v4
Source	SRR1583944
Length	24
Mature sequence(if miRNA)	149 - UCUCUAUAUUGAAUGCACUCAGGU - 172
Stem-loop(if miRNA)	--                                                                                   U   UCUCUAUAUUGAAUGCACUCAGGUGUAAUAUAUAAAAACAGUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUA A   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   AGAGAUAUAACUUACGUGAGUCCACAUUAUAUAUUUUUGUCAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAU U UA                                                                                   A
Stem-loop sequence	UCUCUAUAUUGAAUGCACUCAGGUGUAAUAUAUAAAAACAGUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUACUGUUUUUAUAUAUUACACCUGAGUGCAUUCAAUAUAGAGAAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020547520.1	ncRNA:24   UGGACUCACGUAAGUUAUAUCUCU   1   |||||=|||||||||||||||||| targets:2841   ACCUGGGUGCAUUCAAUAUAGAGA   2864 Target Full Sequence	1.0	PREDICTED: Zea mays putative galacturonosyltransferase 10 (LOC100272968), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020547520.1	ncRNA:24   UGGACUCACGUAAGUUAUAUCUCU   1   *||||=|||||||||||||||||| targets:3630   CCCUGGGUGCAUUCAAUAUAGAGA   3653 Target Full Sequence	1.0	PREDICTED: Zea mays putative galacturonosyltransferase 10 (LOC100272968), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020547519.1	ncRNA:24   UGGACUCACGUAAGUUAUAUCUCU   1   |||||=|||||||||||||||||| targets:2841   ACCUGGGUGCAUUCAAUAUAGAGA   2864 Target Full Sequence	1.0	PREDICTED: Zea mays putative galacturonosyltransferase 10 (LOC100272968), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020547519.1	ncRNA:24   UGGACUCACGUAAGUUAUAUCUCU   1   *||||=|||||||||||||||||| targets:3630   CCCUGGGUGCAUUCAAUAUAGAGA   3653 Target Full Sequence	1.0	PREDICTED: Zea mays putative galacturonosyltransferase 10 (LOC100272968), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020547518.1	ncRNA:24   UGGACUCACGUAAGUUAUAUCUCU   1   |||||=|||||||||||||||||| targets:2841   ACCUGGGUGCAUUCAAUAUAGAGA   2864 Target Full Sequence	1.0	PREDICTED: Zea mays putative galacturonosyltransferase 10 (LOC100272968), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020547518.1	ncRNA:24   UGGACUCACGUAAGUUAUAUCUCU   1   *||||=|||||||||||||||||| targets:3630   CCCUGGGUGCAUUCAAUAUAGAGA   3653 Target Full Sequence	1.0	PREDICTED: Zea mays putative galacturonosyltransferase 10 (LOC100272968), transcript variant X1, mRNA	NA	coding protein	psRNATarget