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BaseInfo

ncRNA ID	novel_zma_miR2983
Species	Zea mays
Class	miRNA
Genome position	Chr5:13444046-13444254 [-]
Reference genome	RefGen_v4
Source	SRR2089714
Length	24
Mature sequence(if miRNA)	186 - AUCUGAAUUUUGGAAAGUGGUGGA - 209
Stem-loop(if miRNA)	--AUCUG                         A    C   CU     A  -         G     -       UUC   U         A  UC      -CC  G        AAUUUUGGAAAGUGGUGGAAUGUCA AUUC AAA  AAAUA GU UAUUUUAUU AGUGA AUUCCAA   CUC AAAAUGAAG GA  CAAACG   CC U        ||||||||||||||||||||||||| |||| |||  ||||| || ||||||||| ||||| |||||||   ||| ||||||||| ||  ||||||   ||        UUGAAACCUUUCACUACCUUACAGU UAAG UUU  UUUAU CG AUAAGGUAA UCAUU UAAGGUU   GAG UUUUACUUU CU  GUUUGC   GG U UAUACUA                         G    A   -U     -  U         -     C       UAA   -         C  UU      CCU  A
Stem-loop sequence	AUCUGAAUUUUGGAAAGUGGUGGAAUGUCAAAUUCCAAACUAAAUAAGUUAUUUUAUUGAGUGAAUUCCAAUUCCUCUAAAAUGAAGAGAUCCAAACGCCCCGUUAGGUCCCGUUUGUUUCCUUUCAUUUUGAGAAUUUGGAAUCUUACUAAUGGAAUAUGCUAUUUUUUUAGAAUGUGACAUUCCAUCACUUUCCAAAGUUAUCAUAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001196331.1	ncRNA:24   AGGUGGUGAAAGGUUUUAAGUCUA   1   ||||||||||||||||=||||||| targets:1854   UCCACCACUUUCCAAAGUUCAGAU   1877 Target Full Sequence	1.5	Zea mays putative acetate/butyrate kinase domain protein (LOC100501651), mRNA	NA	coding protein	psRNATarget
BT085871.1	ncRNA:24   AGGUGGUGAAAGGUUUUAAGUCUA   1   ||||||||||||||||=||||||| targets:1854   UCCACCACUUUCCAAAGUUCAGAU   1877 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0074I21 mRNA, complete cds	NA	coding protein	psRNATarget
BT085458.2	ncRNA:24   AGGUGGUGAAAGGUUUUAAGUCUA   1   **||=||=|||||||||*|||||| targets:11   AACAUCAUUUUCCAAAAGUCAGAU   34 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0015G12 mRNA, complete cds	NA	coding protein	psRNATarget
EZ066665.1	ncRNA:24   AGGUGGUGAAAGGUUUUAAGUCUA   1   **||=||=|||||||||*|||||| targets:32   AACAUCAUUUUCCAAAAGUCAGAU   55 Target Full Sequence	2.5	TSA: Zea mays contig02299, mRNA sequence	NA	coding protein	psRNATarget