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BaseInfo

ncRNA ID novel_zma_miR2971
Species Zea mays
Class miRNA
Genome position Chr5:154681167-154681247 [-]
Reference genome RefGen_v4
Source SRR2089714
Length 24
Mature sequence(if miRNA) 1 - CACCUGGGACACUCGGCAAAGACG - 24
Stem-loop(if miRNA) --             C G     CC               U
  UCUUUGCCGAGUG U UCAGG  GACACUUGGCAAAGG A
  ||||||||||||| | |||||  ||||||||||||||| A
  AGAAACGGCUCAC A GGUCC  CUGUGAGCCGUUUCC C
GC             - G     -A               C
Stem-loop sequence UCUUUGCCGAGUGCUGUCAGGCCGACACUUGGCAAAGGUAACCCCUUUGCCGAGUGUCACCUGGGACACUCGGCAAAGACG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU952231.1
ncRNA:24   GCAGAAACGGCUCACAGGGUCCAC   1
  ***|||||||||||||||*||||*
targets:1445   AUACUUUGCCGAGUGUCCAAGGUA   1468

2.5 Zea mays clone 1234152 mRNA sequence NA coding protein psRNATarget