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BaseInfo

ncRNA ID novel_zma_miR2966
Species Zea mays
Class miRNA
Genome position Chr5:203250013-203250082 [-]
Reference genome RefGen_v4
Source SRR2089714;SRR2647390;SRR5100255
Length 21
Mature sequence(if miRNA) 1 - GCAUUCCAACUUUUGUGACAA - 21
Stem-loop(if miRNA) --                        UG  UU  A
  GUCACAGAAGUUGGGAUGCAAACU  UU  GU G
  ||||||||||||||||||||||||  ||  ||
  CAGUGUUUUCAACCUUACGUUUGA  AG  UA A
AA                        GU  UU  G
Stem-loop sequence GUCACAGAAGUUGGGAUGCAAACUUGUUUUGUAGAGAUUUGAUGAGUUUGCAUUCCAACUUUUGUGACAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU953269.1
ncRNA:21   AACA-GUGUUUUCAACCUUACG   1
  *|||-||*||||||||||||||
targets:1374   AUGUGCAGAAAAGUUGGAAUGC   1395

3.0 Zea mays clone 1395082 hypothetical protein mRNA, complete cds NA coding protein psRNATarget