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BaseInfo

ncRNA ID novel_zma_miR2960
Species Zea mays
Class miRNA
Genome position Chr10:62664970-62665050 [+]
Reference genome RefGen_v4
Source SRR2089714
Length 24
Mature sequence(if miRNA) 58 - CACCUGGGACACUCGGCAAAGACG - 81
Stem-loop(if miRNA) --             C G     CC      C        U
  UCUUUGCCGAGUG U UUAGG  GACACU GGUAAAGG A
  ||||||||||||| | |||||  |||||| |||||||| A
  AGAAACGGCUCAC A GGUCC  CUGUGA CCAUUUCU C
GC             - G     -A      A        U
Stem-loop sequence UCUUUGCCGAGUGCUGUUAGGCCGACACUCGGUAAAGGUAACUUCUUUACCAAGUGUCACCUGGGACACUCGGCAAAGACG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU952231.1
ncRNA:24   GCAGAAACGGCUCACAGGGUCCAC   1
  ***|||||||||||||||*||||*
targets:1445   AUACUUUGCCGAGUGUCCAAGGUA   1468

2.5 Zea mays clone 1234152 mRNA sequence NA coding protein psRNATarget