ncRNA ID | osa-miR1854-3p |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr8:7858365-7858472 [-] |
Reference genome | MSU7 |
Source | miRBase |
Length | 22 |
Mature sequence(if miRNA) | 10 - UCCAAUUUGGGGAUUUGCUGAU - 31 |
Stem-loop(if miRNA) |
C  --UU   A    G      G            UAACCCUAGAACCCCAUUU  GU    UAA UGGU AAAUUU UAGAUUGGAGGG                   U  ||    ||| |||| |||||| ||||||||||||                   U  CG    AUU GUCG UUUAGG GUUUAACCUACA                   G U  UGAU   A    -      G            ACUUUUAGUGUUUAAACCC |
Stem-loop sequence | CGUUUUAAAUGGUGAAAUUUGUAGAUUGGAGGGUAACCCUAGAACCCCAUUUUUGCCCAAAUUUGUGAUUUUCAACAUCCAAUUUGGGGAUUUGCUGAUUAUAGUGCU |
1 | PMID:18687877
"A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains"; Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C; Genome Res. 18:1456-1465(2008). |