ncRNA ID | novel_zma_miR2957 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:76659152-76659288 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089714;SRR2287161;SRR2089699;SRR2089700 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CUCUCUGGUCAGGCGCGGACGGUA - 24 |
Stem-loop(if miRNA) |
--   U   -      -       G  A G      --G -G  A    G       AC     -GU      G   CUC CUG GUCAGG CGCGGAC GU C CGGCCU   G  GC GGAU GUCCGCG  CUGGC   GAGGCG C   ||| ||| |||||| ||||||| || | ||||||   |  || |||| |||||||  |||||   ||||||   GAG GAC UGGUCC GCGCCUG CA G GCCGGG   C  CG CCUG CAGGCGC  GACUG   UUUCGU G UC   -   G      A       G  - -      ACA AG  -    G       -A     GUC      G |
Stem-loop sequence | CUCUCUGGUCAGGCGCGGACGGUACGCGGCCUGGGGCAGGAUGGUCCGCGACCUGGCGUGAGGCGGCGGUGCUUUCUGGUCAGACGCGGACGGUCCGCGACACAGGGCCGGACGGUCCGCGACCUGGUGCAGGAGCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ096610.1 |
|
1.5 | TSA: Zea mays contig32265, mRNA sequence | NA | coding protein | psRNATarget |