| ncRNA ID | osa-miR1854-5p |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr8:7858365-7858472 [-] |
| Reference genome | MSU7 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 79 - UGGUGAAAUUUGUAGAUUGGA - 99 |
| Stem-loop(if miRNA) |
C --UU A G G UAACCCUAGAACCCCAUUU GU UAA UGGU AAAUUU UAGAUUGGAGGG U || ||| |||| |||||| |||||||||||| U CG AUU GUCG UUUAGG GUUUAACCUACA G U UGAU A - G ACUUUUAGUGUUUAAACCC |
| Stem-loop sequence | CGUUUUAAAUGGUGAAAUUUGUAGAUUGGAGGGUAACCCUAGAACCCCAUUUUUGCCCAAAUUUGUGAUUUUCAACAUCCAAUUUGGGGAUUUGCUGAUUAUAGUGCU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_015782545.1 |
|
2.0 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4339438 (LOC4339438), mRNA | uncharacterized LOC4339438(LOC4339438) | coding protein | psRNATarget | |||||||||
| AK070696.1 |
|
2.0 | Oryza sativa Japonica Group cDNA clone:J023057L12, full insert sequence | NA | coding protein | psRNATarget | |||||||||
| AK059274.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:001-025-C02, full insert sequence | NA | coding protein | psRNATarget |
| 1 | PMID:18687877
"A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains"; Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C; Genome Res. 18:1456-1465(2008). |