| ncRNA ID | novel_zma_miR2948 |
| Species | Zea mays |
| Class | miRNA |
| Genome position | Chr4:114057027-114057142 [-] |
| Reference genome | RefGen_v4 |
| Source | SRR2089714;SRR2287160;SRR2287162;SRR2287164;SRR2287165;SRR2089703;SRR2089704 |
| Length | 21 |
| Mature sequence(if miRNA) | 1 - AAAGCUAGAACGACUUAUAAU - 21 |
| Stem-loop(if miRNA) |
--C C AUUUU C UAC AUAAGUCGUUCUAGCUUUU UGGGUACAUAG GUUAUG AUCUGGAUA A ||||||||||||||||||| ||||||||||| |||||| ||||||||| UAUUCAGCAAGAUCGAAAA AUCUAUGUAUC CAAUAC UAGAUCUGU C UAA A AUUUU A CUU |
| Stem-loop sequence | CAUAAGUCGUUCUAGCUUUUCUGGGUACAUAGAUUUUGUUAUGCAUCUGGAUAUACACUUCUGUCUAGAUACAUAACUUUUACUAUGUAUCUAAAAAAGCUAGAACGACUUAUAAU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_020550191.1 |
|
0.0 | PREDICTED: Zea mays proline-rich receptor-like protein kinase PERK1 (LOC103649993), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
| EZ094922.1 |
|
3.0 | TSA: Zea mays contig30574, mRNA sequence | NA | coding protein | psRNATarget |