ncRNA ID | novel_zma_miR2945 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:131272622-131272708 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089714;SRR5099742;SRR5451004;SRR5451006;SRR2089700 |
Length | 22 |
Mature sequence(if miRNA) | 66 - UGACAAGGGAAUUGGAGGGGAG - 87 |
Stem-loop(if miRNA) |
--                    -       UU A         A   UGACAAGGGAAUUGGAGGGG AGGAAAU  C UGCUAUUCA A   |||||||||||||||||||| |||||||  | |||||||||   ACUGUUCCCUUAACCUCCCC UCCUUUA  G ACGAUAAGU A CC                    C       GG A         U |
Stem-loop sequence | UGACAAGGGAAUUGGAGGGGAGGAAAUUUCAUGCUAUUCAAAAUUGAAUAGCAAGGGAUUUCCUCCCCCUCCAAUUCCCUUGUCACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT069264.1 |
|
1.5 | Zea mays full-length cDNA clone ZM_BFc0018B12 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
XM_020551510.1 |
|
2.0 | PREDICTED: Zea mays putative ACT-domain containing protein kinase family protein (LOC100280199), transcript variant X2, mRNA | NA | coding protein | psRNATarget |