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BaseInfo

ncRNA ID novel_zma_miR2945
Species Zea mays
Class miRNA
Genome position Chr4:131272622-131272708 [-]
Reference genome RefGen_v4
Source SRR2089714;SRR5099742;SRR5451004;SRR5451006;SRR2089700
Length 22
Mature sequence(if miRNA) 66 - UGACAAGGGAAUUGGAGGGGAG - 87
Stem-loop(if miRNA) --                    -       UU A         A
  UGACAAGGGAAUUGGAGGGG AGGAAAU  C UGCUAUUCA A
  |||||||||||||||||||| |||||||  | |||||||||
  ACUGUUCCCUUAACCUCCCC UCCUUUA  G ACGAUAAGU A
CC                    C       GG A         U
Stem-loop sequence UGACAAGGGAAUUGGAGGGGAGGAAAUUUCAUGCUAUUCAAAAUUGAAUAGCAAGGGAUUUCCUCCCCCUCCAAUUCCCUUGUCACC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT069264.1
ncRNA:22   GAGGGGAGGUUAAGGGAACAGU   1
  |||||||||||||=||||||||
targets:610   CUCCCCUCCAAUUUCCUUGUCA   631

1.5 Zea mays full-length cDNA clone ZM_BFc0018B12 mRNA, complete cds NA coding protein psRNATarget
XM_020551510.1
ncRNA:22   GAGGGGAGGUUAAGGGAACAGU   1
  *|||||*=||||||||||||||
targets:1577   AUCCCCCUCAAUUCCCUUGUCA   1598

2.0 PREDICTED: Zea mays putative ACT-domain containing protein kinase family protein (LOC100280199), transcript variant X2, mRNA NA coding protein psRNATarget