ncRNA ID | novel_zma_miR2942 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:174733993-174734211 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089714 |
Length | 24 |
Mature sequence(if miRNA) | 196 - UUUAGUAUGGAGACUACAGGAGCC - 219 |
Stem-loop(if miRNA) |
--UUUA         CUA            UG    -C                 UA    A    C AG   C      UA               ------  UC      A       GUAUGGAGA   CAGGAGCCGCUC  CUCU  UUUUGUUGGAAACCAAA  UCCA AAAA U  AAU GAGCCG  CUAUUCUUCUUCACU      CC  AACAUA G       |||||||||   ||||||||||||  ||||  |||||||||||||||||  |||| |||| |  ||| ||||||  |||||||||||||||      ||  ||||||       UAUACCUCU   GUCCUCGGUGAG  GAGA  AAAACAACCUUUGGUUU  AGGU UUUU A  UUA CUCGGU  GAUAAGAGGAGGUGA      GG  UUGUGU G UAAAAG         -AG            GU    AU                 GC    C    A CU   U      GA               AGAAUU  -U      G |
Stem-loop sequence | UUUAGUAUGGAGACUACAGGAGCCGCUCUGCUCUCUUUUGUUGGAAACCAAAUAUCCAAAAAACUAGAAUCGAGCCGUACUAUUCUUCUUCACUCCUCAACAUAAGGGUGUGUUUGGUUAAGAAGUGGAGGAGAAUAGAGUGGCUCUAUUUCAAUUUUCUGGACGUUUGGUUUCCAACAAAAUAAGAGUGGAGUGGCUCCUGGAUCUCCAUAUGAAAAU |