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BaseInfo

ncRNA ID	osa-miR169p
Species	Oryza sativa
Class	miRNA
Genome position	Chr8:7641327-7641452 [-]
Reference genome	MSU7
Source	miRBase
Length	22
Mature sequence(if miRNA)	95 - UAGCCAAGGACAAACUUGCCGG - 116
Stem-loop(if miRNA)	A              CAA         AUCAACA    AGGACUGCCAGUCUCCGGCCAA GAGCA GGUGUAGCCAAGGA   ACUUGCCGG       GAGA                      U ||||| ||||||||||||||   |||||||||       ||||                      U CUCGU CUACGUCGGUUCCU   UGAACGGCC       GCCG                      A      C              -AC         ------G    CUACCGGCUGCCGCUCCAAUUA
Stem-loop sequence	GAGCAAGGUGUAGCCAAGGACAAACUUGCCGGAUCAACAGAGAAGGACUGCCAGUCUCCGGCCAAUUAAUUAACCUCGCCGUCGGCCAUCGCCGGCCGGCAAGUCAUCCUUGGCUGCAUCCUGCUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015780596.1	ncRNA:22   GGCCGUUCAAACAGGAACCGAU   1   ***||||||*|||||||||||* targets:5718   GAAGCAAGUCUGUCCUUGGCUU   5739 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized protein At3g06530 (LOC4336577), mRNA	uncharacterized protein At3g06530(LOC4336577)	coding protein	psRNATarget
XM_015793815.1	ncRNA:22   GGCCGUUCAAACAGGAACCGAU   1   *=||*|||*||||||||||||* targets:1152   GUGGAAAGGUUGUCCUUGGCUU   1173 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4345647 (LOC4345647), mRNA	uncharacterized LOC4345647(LOC4345647)	coding protein	psRNATarget
XM_015758077.1	ncRNA:22   GGCCGUUCAAACAGGAACCGAU   1   *=||*|||*||||||||||||* targets:1208   GUGGAAAGGUUGUCCUUGGCUU   1229 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107279061 (LOC107279061), mRNA	uncharacterized LOC107279061(LOC107279061)	coding protein	psRNATarget

Reference

1	PMID:15200956 "Computational identification of plant microRNAs and their targets, including a stress-induced miRNA"; Jones-Rhoades MW, Bartel DP; Mol Cell. 14:787-799(2004).