ncRNA ID | ath-miRf10037-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 21 |
Mature sequence(if miRNA) | NA - UACUCGACCCCCUGGUCGAGU - NA |
Stem-loop(if miRNA) |
          CCCA             U    CCAUUCUUCCCAUCC   CGACCACCGGGUCGAGUAACCUCAGCUCAGGCGACUCGAUGACACU AUACUCGACC    GGUCGAGUGACUU GUAG               ACU                                              A ||||||||||    ||||||||||||| ||||               ||| UAUGAGCUGG    CCAGCUCAUUGAA CAUC               GCU                                              C           UCCC             C    -----UCACUAACCA   CACAACAGUCCACCACACCGCUUCACUAUGAGCUGGUCCCCCAGCU |
Stem-loop sequence | AUACUCGACCCCCAGGUCGAGUGACUUUGUAGCCAUUCUUCCCAUCCACUCGACCACCGGGUCGAGUAACCUCAGCUCAGGCGACUCGAUGACACUACUCGACCCCCUGGUCGAGUAUCACUUCGCCACACCACCUGACAACACUCGACCAAUCACUCUACCAAGUUACUCGACCCCCUGGUCGAGUAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EF183311.1 |
|
1.0 | Arabidopsis thaliana clone asmbl_5275 unknown mRNA sequence | NA | coding protein | psRNATarget | |||||||||
EF183005.1 |
|
2.5 | Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence | NA | coding protein | psRNATarget |