Search result

BaseInfo

ncRNA ID novel_zma_miR2923
Species Zea mays
Class miRNA
Genome position Chr3:110463233-110463345 [+]
Reference genome RefGen_v4
Source SRR2089714;SRR2089715;SRR2287031;SRR2089699;SRR2089702
Length 21
Mature sequence(if miRNA) 1 - UUGGAAGCAAGGGGAAUGAAG - 21
Stem-loop(if miRNA) --    A  C         -  A          A  C   U   -  U      U  A
  UUGG AG AAGGGGAAU GA GGGAUUGGAG GG UAA GUC CC UGCUAU CA U
  |||| || ||||||||| || |||||||||| || ||| ||| || |||||| ||
  GACU UC UUCCCCUUA CU CCCUAACCUC CC AUU UAG GG AUGAUA GU U
CA    A  -         U  C          C  U   U   A  U      C  U
Stem-loop sequence UUGGAAGCAAGGGGAAUGAAGGGAUUGGAGAGGCUAAUGUCCCUUGCUAUUCAAUUUUGCAUAGUAUGGAGAUUUUAUCCCCUCCAAUCCCCUCUAUUCCCCUUCUAUCAGAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT061675.2
ncRNA:21   GAAGUAAGGGGAACGAAGGUU   1
  =||||*||||||||=||||||
targets:1727   UUUCAGUCCCCUUGUUUCCAA   1747

2.5 Zea mays full-length cDNA clone ZM_BFb0173K21 mRNA, complete cds NA coding protein psRNATarget