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BaseInfo

ncRNA ID	novel_zma_miR2922
Species	Zea mays
Class	miRNA
Genome position	Chr6:165674440-165674544 [-]
Reference genome	RefGen_v4
Source	SRR1583944
Length	23
Mature sequence(if miRNA)	1 - GUGAUCUCUGGUCACCAAACCAG - 23
Stem-loop(if miRNA)	-- A                        C                     UC   G UUUGGUGAUCAGGGAUCACGAGGG AUCCAUGGGGGAGGAAUCCCC  G   | |||||||||||||||||||||||| |||||||||||||||||||||  C   C AAACCACUGGUCUCUAGUGCUCCC UAGGUACCCCCUCCUUAGGGG  U GA C                        C                     UA
Stem-loop sequence	GAUUUGGUGAUCAGGGAUCACGAGGGCAUCCAUGGGGGAGGAAUCCCCUCGCUAUGGGGAUUCCUCCCCCAUGGAUCCCCUCGUGAUCUCUGGUCACCAAACCAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI403328.1	ncRNA:23   GACCAAACCACUGGUCUCUAGUG   1   ||||||||||||||||=|||||| targets:7   CUGGUUUGGUGACCAGGGAUCAC   29 Target Full Sequence	1.5	Sequence 1453 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235458.1	ncRNA:23   GACCAAACCACUGGUCUCUAGUG   1   ||||||||||||||||=|||||| targets:7   CUGGUUUGGUGACCAGGGAUCAC   29 Target Full Sequence	1.5	Sequence 1453 from Patent EP2985353	NA	coding protein	psRNATarget
JB163789.1	ncRNA:23   GACCAAACCACUGGUCUCUAGUG   1   ||||||||||||||||=|||||| targets:7   CUGGUUUGGUGACCAGGGAUCAC   29 Target Full Sequence	1.5	Sequence 1453 from Patent EP2559767	NA	coding protein	psRNATarget
HI403300.1	ncRNA:23   GACCAAACCACUGGUCUCUAGUG   1   |||*||||||||||||=|||||| targets:7   CUGAUUUGGUGACCAGGGAUCAC   29 Target Full Sequence	1.5	Sequence 1425 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235557.1	ncRNA:23   GACCAAACCACUGGUCUCUAGUG   1   |||*||||||||||||=|||||| targets:7   CUGAUUUGGUGACCAGGGAUCAC   29 Target Full Sequence	1.5	Sequence 1552 from Patent EP2985353	NA	coding protein	psRNATarget
LQ235430.1	ncRNA:23   GACCAAACCACUGGUCUCUAGUG   1   |||*||||||||||||=|||||| targets:7   CUGAUUUGGUGACCAGGGAUCAC   29 Target Full Sequence	1.5	Sequence 1425 from Patent EP2985353	NA	coding protein	psRNATarget
HI403427.1	ncRNA:23   GACCAAACCACUGGUCUCUAGUG   1   |||*||||||||||||=|||||| targets:7   CUGAUUUGGUGACCAGGGAUCAC   29 Target Full Sequence	1.5	Sequence 1552 from Patent EP2074227	NA	coding protein	psRNATarget
JB163888.1	ncRNA:23   GACCAAACCACUGGUCUCUAGUG   1   |||*||||||||||||=|||||| targets:7   CUGAUUUGGUGACCAGGGAUCAC   29 Target Full Sequence	1.5	Sequence 1552 from Patent EP2559767	NA	coding protein	psRNATarget
JB163761.1	ncRNA:23   GACCAAACCACUGGUCUCUAGUG   1   |||*||||||||||||=|||||| targets:7   CUGAUUUGGUGACCAGGGAUCAC   29 Target Full Sequence	1.5	Sequence 1425 from Patent EP2559767	NA	coding protein	psRNATarget
EZ095368.1	ncRNA:23   GACCAAACCACUGGUCUCUAGUG   1   =||*||||||||=|||||||||| targets:36   UUGAUUUGGUGAUCAGAGAUCAC   58 Target Full Sequence	1.5	TSA: Zea mays contig31021, mRNA sequence	NA	coding protein	psRNATarget
XM_008667073.2	ncRNA:23   GACCAAACCACUGGUCUCUAGUG   1   =||*||||||||=|||||||||| targets:3291   UUGAUUUGGUGAUCAGAGAUCAC   3313 Target Full Sequence	1.5	PREDICTED: Zea mays exportin-2 (LOC103643902), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008667075.2	ncRNA:23   GACCAAACCACUGGUCUCUAGUG   1   =||*||||||||=|||||||||| targets:3307   UUGAUUUGGUGAUCAGAGAUCAC   3329 Target Full Sequence	1.5	PREDICTED: Zea mays exportin-2 (LOC103643902), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008667074.2	ncRNA:23   GACCAAACCACUGGUCUCUAGUG   1   =||*||||||||=|||||||||| targets:3311   UUGAUUUGGUGAUCAGAGAUCAC   3333 Target Full Sequence	1.5	PREDICTED: Zea mays exportin-2 (LOC103643902), transcript variant X2, mRNA	NA	coding protein	psRNATarget
EU948260.1	ncRNA:23   GACCAAACCACUGGUCUCUAGUG   1   *|*||||||||=||||||||||| targets:324   GUUGUUUGGUGGCCAGAGAUCAC   346 Target Full Sequence	1.5	Zea mays clone 371984 mRNA sequence	NA	coding protein	psRNATarget
EU975542.1	ncRNA:23   GACCAAACCACUGGUCUCUAGUG   1   |***||||||||||||||*|||= targets:69   CCAAUUUGGUGACCAGAGUUCAU   91 Target Full Sequence	2.5	Zea mays clone 492118 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget