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BaseInfo

ncRNA ID novel_zma_miR2914
Species Zea mays
Class miRNA
Genome position Chr3:131735616-131735683 [-]
Reference genome RefGen_v4
Source SRR2089714
Length 23
Mature sequence(if miRNA) 1 - UUUGCCGAGUGCCAGAUCACGGU - 23
Stem-loop(if miRNA) --U C                   AAUA     A
   G GAUCUGGCACUCGGCAAAG    UUUUA A
   | |||||||||||||||||||    |||||
   C CUAGACCGUGAGCCGUUUC    AAAAU A
UGG A                   AAAA     U
Stem-loop sequence UGCGAUCUGGCACUCGGCAAAGAAUAUUUUAAAAUUAAAAAAAACUUUGCCGAGUGCCAGAUCACGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB170420.1
ncRNA:23   UGGCACU-AGACCGUGAGCCGUUU   1
  ===|||=-||||||||||||||||
targets:38   GUUGUGGCUCUGGCACUCGGCAAA   61

3.0 Sequence 8084 from Patent EP2559767 NA coding protein psRNATarget
HI409959.1
ncRNA:23   UGGCACU-AGACCGUGAGCCGUUU   1
  ===|||=-||||||||||||||||
targets:38   GUUGUGGCUCUGGCACUCGGCAAA   61

3.0 Sequence 8084 from Patent EP2074227 NA coding protein psRNATarget
LQ242089.1
ncRNA:23   UGGCACU-AGACCGUGAGCCGUUU   1
  ===|||=-||||||||||||||||
targets:38   GUUGUGGCUCUGGCACUCGGCAAA   61

3.0 Sequence 8084 from Patent EP2985353 NA coding protein psRNATarget
EZ067174.1
ncRNA:23   UGG--CACUAGACCGUGAGCCGUUU   1
  |=|--|||=*|||||||||||||||
targets:9   AUCUGGUGGACUGGCACUCGGCAAA   33

2.0 TSA: Zea mays contig02808, mRNA sequence NA coding protein psRNATarget
LQ238871.1
ncRNA:23   UGGCACUAGACCGUGAGCCGUUU   1
  =|=|*|*|=||||||||||||||
targets:112   GCUGGGCUUUGGCACUCGGCAAA   134

3.0 Sequence 4866 from Patent EP2985353 NA coding protein psRNATarget
HI406741.1
ncRNA:23   UGGCACUAGACCGUGAGCCGUUU   1
  =|=|*|*|=||||||||||||||
targets:112   GCUGGGCUUUGGCACUCGGCAAA   134

3.0 Sequence 4866 from Patent EP2074227 NA coding protein psRNATarget
JB167202.1
ncRNA:23   UGGCACUAGACCGUGAGCCGUUU   1
  =|=|*|*|=||||||||||||||
targets:112   GCUGGGCUUUGGCACUCGGCAAA   134

3.0 Sequence 4866 from Patent EP2559767 NA coding protein psRNATarget
EU942524.1
ncRNA:23   UGGCACUAG-ACCGUGAGCCGUUU   1
  =*=|||*||-||||||||||||||
targets:375   GAUGUGCUCAUGGCACUCGGCAAA   398

3.0 Zea mays clone 1513654 mRNA sequence NA coding protein psRNATarget