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BaseInfo

ncRNA ID	novel_zma_miR2912
Species	Zea mays
Class	miRNA
Genome position	Chr3:174666415-174666488 [-]
Reference genome	RefGen_v4
Source	SRR2089714;SRR2089706
Length	24
Mature sequence(if miRNA)	1 - GGAGAGAAUCUGGCUGUGGGGAGA - 24
Stem-loop(if miRNA)	--   G U    U   C        --      C   U   UCU U UGGU CAG UUUUUUCU  GACCAG UUU C   ||| | |||| ||| ||||||||  |||||| ||| U   AGG G GUCG GUC AAGAGAGG  UUGGUC AAA G AG   G U    -   U        UG      U   A
Stem-loop sequence	UCUGUUUGGUUCAGCUUUUUUCUGACCAGCUUUUCUGAAAAUCUGGUUGUGGAGAGAAUCUGGCUGUGGGGAGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_001157033.2	ncRNA:24   AGAGGGGUGUCGGUCUAAGAGAGG   1   ***|=||=||*||||||||||||| targets:234   GACCUCCGCAACCAGAUUCUCUCC   257 Target Full Sequence	2.0	Zea mays peptidyl-prolyl cis-trans isomerase 1 (LOC100284136), mRNA	NA	coding protein	psRNATarget
AY105450.2	ncRNA:24   AGAGGGGUGUCGGUCUAAGAGAGG   1   ***|=||=||*||||||||||||| targets:241   GACCUCCGCAACCAGAUUCUCUCC   264 Target Full Sequence	2.0	Zea mays PCO137313 mRNA sequence	NA	coding protein	psRNATarget
EU967190.1	ncRNA:24   AGAGGGGUGUCGGUCUAAGAGAGG   1   ***|=||=||*||||||||||||| targets:230   GACCUCCGCAACCAGAUUCUCUCC   253 Target Full Sequence	2.0	Zea mays clone 300154 peptidyl-prolyl cis-trans isomerase 1 mRNA, complete cds	NA	coding protein	psRNATarget
EZ076424.1	ncRNA:24   AGAGGGGUGUCGGUCUAAGAGAGG   1   *|****||||||=||||||||||| targets:70   ACAAAACACAGCUAGAUUCUCUCC   93 Target Full Sequence	2.5	TSA: Zea mays contig12061, mRNA sequence	NA	coding protein	psRNATarget