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BaseInfo

ncRNA ID	novel_zma_miR2904
Species	Zea mays
Class	miRNA
Genome position	Chr3:216731373-216731462 [-]
Reference genome	RefGen_v4
Source	SRR2089714
Length	23
Mature sequence(if miRNA)	1 - UCGGGAGUGGACGAGGGUGUUAC - 23
Stem-loop(if miRNA)	--       G    G    G   ---    A   AUG     AGA  G   AAUACUC UGUU AUUU UGG   GGCG UAU   AUUCU   GG C   ||||||| |||| |||| |||   |||| |||   |||||   ||   UUGUGGG GCAG UGAG GCU   CCGC AUG   UGAGG   CC U CA       A    G    G   UGG    G   -AA     --A  A
Stem-loop sequence	AAUACUCGUGUUGAUUUGUGGGGCGAUAUAUGAUUCUAGAGGGCUACCAGGAGUAAGUAGCGCCGGUUCGGGAGUGGACGAGGGUGUUAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU967834.1	ncRNA:23   CAUUGUGGGAGCAGGUGAGGGCU   1   **|=|||=*|||||||||||||* targets:86   CGAGCACUGUCGUCCACUCCCGC   108 Target Full Sequence	3.0	Zea mays clone 306460 polygalacturonase inhibitor 2 precursor, mRNA, complete cds	NA	coding protein	psRNATarget
AJ577238.1	ncRNA:23   CAUUGUGGGAGCAGGUGAGGGCU   1   ****||||=|||||||*|||||| targets:63   CACCCACCUUCGUCCAAUCCCGA   85 Target Full Sequence	2.5	Zea mays mRNA for putative beta3-glucuronyltransferase (pglcat4 gene), clone 1	NA	coding protein	psRNATarget
BT067137.1	ncRNA:23   CAUUGUGGGAGCAGGUGAGGGCU   1   ****||||=|||||||*|||||| targets:298   CACCCACCUUCGUCCAAUCCCGA   320 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0206G05 mRNA, complete cds	NA	coding protein	psRNATarget
BT039755.1	ncRNA:23   CAUUGUGGGAGCAGGUGAGGGCU   1   ****||||=|||||||*|||||| targets:298   CACCCACCUUCGUCCAAUCCCGA   320 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0043D19 mRNA, complete cds	NA	coding protein	psRNATarget
BT066388.1	ncRNA:23   CAUUGUGGGAGCAGGUGAGGGCU   1   ****||||=|||||||*|||||| targets:367   CACCCACCUUCGUCCAAUCCCGA   389 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0036J24 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001147361.1	ncRNA:23   CAUUGUGGGAGCAGGUGAGGGCU   1   ****||||=|||||||*|||||| targets:367   CACCCACCUUCGUCCAAUCCCGA   389 Target Full Sequence	2.5	Zea mays beta3-glucuronyltransferase (LOC100272909), mRNA	NA	coding protein	psRNATarget