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BaseInfo

ncRNA ID	novel_zma_miR2901
Species	Zea mays
Class	miRNA
Genome position	Chr3:202324355-202324418 [+]
Reference genome	RefGen_v4
Source	SRR2089714
Length	24
Mature sequence(if miRNA)	1 - AACCGGAGAGGAUUGGAGGGGCUA - 24
Stem-loop(if miRNA)	-AAC     AG                  CA     CGGAG  GAUUGGAGGGGCUAAAAU  A     |||||  ||||||||||||||||||  C     GUCUC  CUAAUUUCCCCGAUUUUA  U UUUU     CU                  UU
Stem-loop sequence	AACCGGAGAGGAUUGGAGGGGCUAAAAUCAACUUUAUUUUAGCCCCUUUAAUCUCCUCUGUUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020543912.1	ncRNA:24   AUCGGGGAGGUUAGGAGAGGCCAA   1   ||||||||||||||||=||||||| targets:4127   UAGCCCCUCCAAUCCUUUCCGGUU   4150 Target Full Sequence	1.5	PREDICTED: Zea mays coronatine-insensitive protein homolog 2-like (LOC103638597), mRNA	NA	coding protein	psRNATarget
XM_008654495.2	ncRNA:24   AUCGGGGAGGUUAGGAGAGGCCAA   1   ||||||||=||||||*|||||||| targets:1113   UAGCCCCUUCAAUCCCCUCCGGUU   1136 Target Full Sequence	2.5	PREDICTED: Zea mays probable GMP synthase [glutamine-hydrolyzing] (LOC103632764), mRNA	NA	coding protein	psRNATarget
XM_020539411.1	ncRNA:24   AUCGGGGAGGUUAGGAGAGGCCAA   1   |||||||||||||||*|||||||* targets:3500   UAGCCCCUCCAAUCCCCUCCGGUA   3523 Target Full Sequence	2.5	PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X7, mRNA	NA	coding protein	psRNATarget
XM_020539397.1	ncRNA:24   AUCGGGGAGGUUAGGAGAGGCCAA   1   |||||||||||||||*|||||||* targets:3535   UAGCCCCUCCAAUCCCCUCCGGUA   3558 Target Full Sequence	2.5	PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008664337.2	ncRNA:24   AUCGGGGAGGUUAGGAGAGGCCAA   1   ||*=|=|||||||||||||||||| targets:2084   UAUUCUCUCCAAUCCUCUCCGGUU   2107 Target Full Sequence	1.0	PREDICTED: Zea mays ABC transporter F family member 1 (LOC103640881), mRNA	NA	coding protein	psRNATarget
EU957568.1	ncRNA:24   AUCGGGGAGGUUAGGAGAGGCCAA   1   ||||*|*||||||=|||||||||| targets:915   UAGCGCAUCCAAUUCUCUCCGGUU   938 Target Full Sequence	2.5	Zea mays clone 1597470 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
XM_008667867.1	ncRNA:24   AUCGGGGAGGUUAGGAGAGGCCAA   1   ||*||||||||||||*|||||||* targets:1031   UAACCCCUCCAAUCCCCUCCGGUA   1054 Target Full Sequence	2.5	PREDICTED: Zea mays 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (LOC103644703), mRNA	NA	coding protein	psRNATarget