| ncRNA ID | osa-miR1437b-3p |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr8:3955862-3956129 [-] |
| Reference genome | MSU7 |
| Source | miRBase |
| Length | 24 |
| Mature sequence(if miRNA) | 71 - GUGCUGGCGAGCUCCGGUGCCGCA - 94 |
| Stem-loop(if miRNA) |
A C A A A - ---- C -- A C CAA CGGAGGAAGGAGGCCGGCGCACAGAGGACGAG GGUGA GGCGCGUGGGGAGGGAGG AAC GUGCCUAGUGCGGCGCCGGAGCUCGCCAGCACGCGG AG GAGGU AG GGCGGUGGC GG GCGC GG G |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| || ||||| || ||||||||| || |||| || GCCUCCUUCCUCCGGCCGCGUGUCUCCUGCUC CCACU CCGCGCGCCCCUCCCUCC UUG CACGGAUCACGCCGUGGCCUCGAGCGGUCGUGCGUC UC CUCCA UC CUGCCGCCG CC CGCG CC C G A C C C A CUCC - GU - - UCU |
| Stem-loop sequence | CGGAGGAAGGAGGCCGGCGCACAGAGGACGAGAGGUGACGGCGCGUGGGGAGGGAGGAAACAGUGCCUAGUGCGGCGCCGGAGCUCGCCAGCACGCGGAAGGAGGUAGCGGCGGUGGCGGAGCGCCGGCAAGCUCUCCGCGCCCUGGCCGCCGUCCUCCUCACCUCACUCCUGCGUGCUGGCGAGCUCCGGUGCCGCACUAGGCACCGUUCCCUCCCUCCCCGCGCGCCAUCACCGCUCGUCCUCUGUGCGCCGGCCUCCUUCCUCCG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_015760804.1 |
|
3.0 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107276845 (LOC107276845), mRNA | uncharacterized LOC107276845(LOC107276845) | coding protein | psRNATarget |
| 1 | PMID:23627500
"Identification of a novel microRNA (miRNA) from rice that targets an alternatively spliced transcript of the Nramp6 (Natural resistance-associated macrophage protein 6) gene involved in pathogen resistance"; Campo S, Peris-Peris C, Sire C, Moreno AB, Donaire L, Zytnicki M, Notredame C, Llave C, San Segundo B; New Phytol. 199:212-227(2013). |