ncRNA ID | novel_zma_miR2883 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:77248847-77249026 [+] |
Reference genome | RefGen_v4 |
Source | SRR1583944;SRR2647221;SRR2647387;SRR2647390;SRR1583943 |
Length | 24 |
Mature sequence(if miRNA) | 157 - AGAUUCUUUACAUCCGGUAUGUAA - 180 |
Stem-loop(if miRNA) |
--                -C   A                    C  CCAC   AA  C   C A       UC    ----U    A   UA   ACAUACCGGAUGUAAA  AUC UCUUUUACAGCCCCUCACAU CA    UUG  GG CCA A AGACAGA  AAAA     UUAC AAA  A   ||||||||||||||||  ||| |||||||||||||||||||| ||    |||  || ||| | |||||||  ||||     |||| |||   UGUAUGGCCUACAUUU  UAG AGAAAAUGUCGGGGAGUGUA GU    AAC  CC GGU U UUUGUCU  UUUU     AAUG UUU  C AA                CU   -                    U  UAUC   AA  A   A A       UU    UAUUU    A   CC |
Stem-loop sequence | ACAUACCGGAUGUAAACAUCAUCUUUUACAGCCCCUCACAUCCACCACUUGAAGGCCCACAAAGACAGAUCAAAAUUUACAAAAUAACCCUUUAGUAAUUUAUUUUUUUUCUGUUUAUAUGGACCAACAACUAUUGUAUGUGAGGGGCUGUAAAAGAGAUUCUUUACAUCCGGUAUGUAA |