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BaseInfo

ncRNA ID novel_zma_miR2883
Species Zea mays
Class miRNA
Genome position Chr1:77248847-77249026 [+]
Reference genome RefGen_v4
Source SRR1583944;SRR2647221;SRR2647387;SRR2647390;SRR1583943
Length 24
Mature sequence(if miRNA) 157 - AGAUUCUUUACAUCCGGUAUGUAA - 180
Stem-loop(if miRNA) --                -C   A                    C  CCAC   AA  C   C A       UC    ----U    A   UA
  ACAUACCGGAUGUAAA  AUC UCUUUUACAGCCCCUCACAU CA    UUG  GG CCA A AGACAGA  AAAA     UUAC AAA  A
  ||||||||||||||||  ||| |||||||||||||||||||| ||    |||  || ||| | |||||||  ||||     |||| |||
  UGUAUGGCCUACAUUU  UAG AGAAAAUGUCGGGGAGUGUA GU    AAC  CC GGU U UUUGUCU  UUUU     AAUG UUU  C
AA                CU   -                    U  UAUC   AA  A   A A       UU    UAUUU    A   CC
Stem-loop sequence ACAUACCGGAUGUAAACAUCAUCUUUUACAGCCCCUCACAUCCACCACUUGAAGGCCCACAAAGACAGAUCAAAAUUUACAAAAUAACCCUUUAGUAAUUUAUUUUUUUUCUGUUUAUAUGGACCAACAACUAUUGUAUGUGAGGGGCUGUAAAAGAGAUUCUUUACAUCCGGUAUGUAA