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BaseInfo

ncRNA ID novel_zma_miR2881
Species Zea mays
Class miRNA
Genome position Chr6:15456649-15456706 [+]
Reference genome RefGen_v4
Source SRR1583944;SRR2647386;SRR2647391
Length 24
Mature sequence(if miRNA) 35 - CCGUCGGUUUAGGGCUUAUUCCCU - 58
Stem-loop(if miRNA) --                    A     U
  GGAAUAAGCCCUAAACUGAC GGAAU A
  |||||||||||||||||||| |||||
  CCUUAUUCGGGAUUUGGCUG CCUUA C
UC                    C     U
Stem-loop sequence GGAAUAAGCCCUAAACUGACAGGAAUUACUAUUCCCGUCGGUUUAGGGCUUAUUCCCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB169151.1
ncRNA:24   UCCCUUAUUCGGGAUUUGGCUGCC   1
  *|||||||||||||||||||||||
targets:20   CGGGAAUAAGCCCUAAACCGACGG   43

0.0 Sequence 6815 from Patent EP2559767 NA coding protein psRNATarget
HI408690.1
ncRNA:24   UCCCUUAUUCGGGAUUUGGCUGCC   1
  *|||||||||||||||||||||||
targets:20   CGGGAAUAAGCCCUAAACCGACGG   43

0.0 Sequence 6815 from Patent EP2074227 NA coding protein psRNATarget
LQ240820.1
ncRNA:24   UCCCUUAUUCGGGAUUUGGCUGCC   1
  *|||||||||||||||||||||||
targets:20   CGGGAAUAAGCCCUAAACCGACGG   43

0.0 Sequence 6815 from Patent EP2985353 NA coding protein psRNATarget