Search result

BaseInfo

ncRNA ID novel_zma_miR2879
Species Zea mays
Class miRNA
Genome position Chr10:83880219-83880269 [-]
Reference genome RefGen_v4
Source SRR2089714
Length 24
Mature sequence(if miRNA) 28 - CGACGGGUAAACGGGGAUGGGGAA - 51
Stem-loop(if miRNA) --  A    UA        U     A
  CG CGGG  AACGGGGA GGGGA G
  || ||||  |||||||| ||||| C
  GC GCCC  UUGCCCCU CCCCU A
GG  -    -C        U     U
Stem-loop sequence CGACGGGUAAACGGGGAUGGGGAAGCAUUCCCCUUCCCCGUUCCCCGCGGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020542351.1
ncRNA:24   AAGGGGUAGGGGCAAAUGGGCAGC   1
  *|||||||||||||||||||||||
targets:311   AUCCCCAUCCCCGUUUACCCGUCG   334

0.0 PREDICTED: Zea mays uncharacterized LOC103634680 (LOC103634680), transcript variant X5, mRNA NA coding protein psRNATarget