ncRNA ID | novel_zma_miR2875 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:147515302-147515374 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089713;SRR2287031;SRR2287162;SRR2089698;SRR2089703 |
Length | 24 |
Mature sequence(if miRNA) | 50 - GGGCUCCUGUACCAGGUCGCGGAC - 73 |
Stem-loop(if miRNA) |
--  -    -   UAC    U       C    --   C   GG GCUC CUG   CAGG CGCGGAC GUCC  GGC C   || |||| |||   |||| ||||||| ||||  ||| U   CC CGAG GAC   GUUC GUGCCUG CAGG  CCG G UU  A    A   -CA    -       C    CG   U |
Stem-loop sequence | GGGCUCCUGUACCAGGUCGCGGACCGUCCGGCCCUGUGCCGCGGACCGUCCGUGCUUGACCAGAGAGCACCUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008666064.2 |
|
2.5 | PREDICTED: Zea mays expansin-B5 (LOC103642905), mRNA | NA | coding protein | psRNATarget | |||||||||
NM_001156821.2 |
|
2.5 | Zea mays beta-expansin 2 (LOC100283923), mRNA | NA | coding protein | psRNATarget | |||||||||
EU966422.1 |
|
2.5 | Zea mays clone 294390 beta-expansin 2 precursor, mRNA, complete cds | NA | coding protein | psRNATarget |