ncRNA ID | novel_zma_miR2865 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr6:96821007-96821153 [+] |
Reference genome | RefGen_v4 |
Source | SRR1583944 |
Length | 24 |
Mature sequence(if miRNA) | 124 - AAUCUGGUGCAUCCAUUUCGCAUC - 147 |
Stem-loop(if miRNA) |
--   A                                                       C              UGC AGAUGGAUGCACCAGAUUUAAAAUGUGCACAUGAGCACCGUACCCCUUUGAGCAC AGAUACGUUCCC   ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||G   ACG UUUACCUACGUGGUCUAAAUUUUACACGUGUACUCGUGGCAUGGGGAAACUCGUG UCUAUGCAAGGU CU   C                                                       A            |
Stem-loop sequence | UGCAAGAUGGAUGCACCAGAUUUAAAAUGUGCACAUGAGCACCGUACCCCUUUGAGCACCAGAUACGUUCCCGUGGAACGUAUCUAGUGCUCAAAGGGGUACGGUGCUCAUGUGCACAUUUUAAAUCUGGUGCAUCCAUUUCGCAUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008645476.2 |
|
1.5 | PREDICTED: Zea mays tic20-like protein (LOC100282929), transcript variant X1, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_020551532.1 |
|
1.5 | PREDICTED: Zea mays uncharacterized LOC100282291 (pco125364), transcript variant X1, mRNA | NA | coding protein | psRNATarget |