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BaseInfo

ncRNA ID osa-miR1853-5p
Species Oryza sativa
Class miRNA
Genome position Chr8:3689091-3689179 [-]
Reference genome MSU7
Source miRBase
Length 24
Mature sequence(if miRNA) 56 - AGCAUUCAAACAUUCCCAAUUACC - 79
Stem-loop(if miRNA)               UU A                  C  CUCC
CGCAACUUCGAGCA  C AACAUUCCCAAUUACCAU GC    C
||||||||||||||  | |||||||||||||||||| ||    U
GCGUUGGAGCUCGU  G UUGUAGGGGUUAAUGGUA CG    A
              UG C                  A  ACAA
Stem-loop sequence CGCAACUUCGAGCAUUCAAACAUUCCCAAUUACCAUCGCCUCCCUAAACAGCAAUGGUAAUUGGGGAUGUUCGGUUGCUCGAGGUUGCG

Reference

1 PMID:18687877
"A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains";
Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C;
Genome Res. 18:1456-1465(2008).