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BaseInfo

ncRNA ID novel_zma_miR2857
Species Zea mays
Class miRNA
Genome position Chr6:173973498-173973684 [-]
Reference genome RefGen_v4
Source SRR1583941
Length 22
Mature sequence(if miRNA) 1 - AAAUGAUGUGGCAUAUUGACGU - 22
Stem-loop(if miRNA) --A    CU         U                        C          UC    --   C  UUAAUC  C   -  C      CC   CA
   UCAA  UGCUACAUC UUUCUCAAAAUAAAAUAAUGACCA GGAAAAUUUA  CCAA  UGA GU      GA UAG CC AAUGUG  UUA  A
   ||||  ||||||||| |||||||||||||||||||||||| ||||||||||  ||||  ||| ||      || ||| || ||||||  |||
   AGUU  ACGGUGUAG AAAGAGUUUUAUUUUGUUACUGGU CCUUUUAAAU  GGUU  ACU CA      CU GUC GG UUGUAU  AAU  C
UGC    AU         U                        A          -C    UA   -  --CUCU  U   A  U      CC   UC
Stem-loop sequence AUCAACUUGCUACAUCUUUUCUCAAAAUAAAAUAAUGACCACGGAAAAUUUAUCCCAAUGACGUUUAAUCGACUAGCCCAAUGUGCCUUACAACCUUAACCUAUGUUUGGACUGUUCUCUCACUCAAUUUGGCUAAAUUUUCCAUGGUCAUUGUUUUAUUUUGAGAAAUGAUGUGGCAUAUUGACGU