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BaseInfo

ncRNA ID novel_zma_miR2855
Species Zea mays
Class miRNA
Genome position Chr2:15305254-15305342 [+]
Reference genome RefGen_v4
Source SRR2089713;SRR2287161;SRR2089708
Length 24
Mature sequence(if miRNA) 1 - UAAACUAAGAACGUGGGUACUCAC - 24
Stem-loop(if miRNA) --    C                   A     CAACAAACCCAU
  UAAA UAAGAACGUGGGUACUCAC UUCUU            G
  |||| ||||||||||||||||||| |||||            A
  AUUU AUUCUUGCACCCAUGGGUG AAGAA            A
CA    A                   C     UAAACUCAAUUC
Stem-loop sequence UAAACUAAGAACGUGGGUACUCACAUUCUUCAACAAACCCAUGAACUUAACUCAAAUAAGAACGUGGGUACCCACGUUCUUAAUUUAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB163678.1
ncRNA:24   CACUCAUGGGUGCAAGAAUCAAAU   1
  |||=*||||||=||||||||||||
targets:59   GUGGAUACCCAUGUUCUUAGUUUA   82

1.5 Sequence 1342 from Patent EP2559767 NA coding protein psRNATarget
LQ235347.1
ncRNA:24   CACUCAUGGGUGCAAGAAUCAAAU   1
  |||=*||||||=||||||||||||
targets:59   GUGGAUACCCAUGUUCUUAGUUUA   82

1.5 Sequence 1342 from Patent EP2985353 NA coding protein psRNATarget
HI403217.1
ncRNA:24   CACUCAUGGGUGCAAGAAUCAAAU   1
  |||=*||||||=||||||||||||
targets:59   GUGGAUACCCAUGUUCUUAGUUUA   82

1.5 Sequence 1342 from Patent EP2074227 NA coding protein psRNATarget