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BaseInfo

ncRNA ID	novel_zma_miR2843
Species	Zea mays
Class	miRNA
Genome position	Chr1:27013985-27014044 [-]
Reference genome	RefGen_v4
Source	SRR2089713
Length	21
Mature sequence(if miRNA)	1 - UCCUUCGAUCCAGACGUAACC - 21
Stem-loop(if miRNA)	--G       A         GG  G  U      UGCGUCU GAUCGAAGG  AU UG GGC    ||||||| |||||||||  || || ||C    AUGCAGA CUAGCUUCC  UA AC CCC CCA       C         UU  -  U
Stem-loop sequence	GUGCGUCUAGAUCGAAGGGGAUGUGUGGCCCCCUCAAUUUCCUUCGAUCCAGACGUAACC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI402991.1	ncRNA:21   CCAAUGCAGACCUAGCUUCCU   1   ||||=|||||||||||||||| targets:8   GGUUGCGUCUGGAUCGAAGGA   28 Target Full Sequence	1.0	Sequence 1116 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235121.1	ncRNA:21   CCAAUGCAGACCUAGCUUCCU   1   ||||=|||||||||||||||| targets:8   GGUUGCGUCUGGAUCGAAGGA   28 Target Full Sequence	1.0	Sequence 1116 from Patent EP2985353	NA	coding protein	psRNATarget
JB163452.1	ncRNA:21   CCAAUGCAGACCUAGCUUCCU   1   ||||=|||||||||||||||| targets:8   GGUUGCGUCUGGAUCGAAGGA   28 Target Full Sequence	1.0	Sequence 1116 from Patent EP2559767	NA	coding protein	psRNATarget
BT069231.2	ncRNA:21   CCAAUGCAGACCUAGCUUCCU   1   ||||||||||||||||||||= targets:982   GGUUACGUCUGGAUCGAAGGG   1002 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0366D18 mRNA, complete cds	NA	coding protein	psRNATarget
HI403013.1	ncRNA:21   CCAAUGCAGACCUAGCUUCCU   1   *|||=|||||||||||||||| targets:8   UGUUGCGUCUGGAUCGAAGGA   28 Target Full Sequence	1.0	Sequence 1138 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235143.1	ncRNA:21   CCAAUGCAGACCUAGCUUCCU   1   *|||=|||||||||||||||| targets:8   UGUUGCGUCUGGAUCGAAGGA   28 Target Full Sequence	1.0	Sequence 1138 from Patent EP2985353	NA	coding protein	psRNATarget
JB163474.1	ncRNA:21   CCAAUGCAGACCUAGCUUCCU   1   *|||=|||||||||||||||| targets:8   UGUUGCGUCUGGAUCGAAGGA   28 Target Full Sequence	1.0	Sequence 1138 from Patent EP2559767	NA	coding protein	psRNATarget
EU951391.1	ncRNA:21   CCAAUGCAGACCUAGCUUCCU   1   ||||=||*||||||||||||= targets:273   GGUUGCGCCUGGAUCGAAGGG   293 Target Full Sequence	3.0	Zea mays clone 698039 mRNA sequence	NA	coding protein	psRNATarget
XM_020538933.1	ncRNA:21   CCAAUGCAGACCUAGCUUCCU   1   ***|||||||||||||||||= targets:916   UAAUACGUCUGGAUCGAAGGG   936 Target Full Sequence	2.0	PREDICTED: Zea mays RNA polymerase Rpc34 subunit family protein (TIDP3103), transcript variant X2, mRNA	NA	coding protein	psRNATarget