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BaseInfo

ncRNA ID novel_zma_miR2841
Species Zea mays
Class miRNA
Genome position Chr1:40116279-40116483 [-]
Reference genome RefGen_v4
Source SRR2089713
Length 24
Mature sequence(if miRNA) 182 - CUGUUCGAGUCUGGCCUGCAGCGG - 205
Stem-loop(if miRNA) --   -      UC    - U  AGC  GC   AA      -  A        UUUA       A  A     UUAA      UA  ----   AAACAGACCGUACCAG
  CUG UUCGAG  UGGC C GC   GG  CUA  CGGGCC GG CCGGUCCG    GCACGAA AA UGGGU    CGGGCU  GA    GGU                G
  ||| ||||||  |||| | ||   ||  |||  |||||| || ||||||||    ||||||| || |||||    ||||||  ||    |||                C
  GAC AGGUUC  GCCG G UG   CC  GAU  GCCCGG CC GGCCGGGC    CGUGCUU UU GCCCA    GCUCGA  CU    UCU                U
CA   C      GA    U C  -GA  AA   AC      A  C        ----       A  C     ----      GC  AUUC   GAUCCGUGCUACCCGA
Stem-loop sequence CUGUUCGAGUCUGGCCUGCAGCGGGCCUAAACGGGCCGGACCGGUCCGUUUAGCACGAAAAAAUGGGUUUAACGGGCUUAGAGGUAAACAGACCGUACCAGGCUAGCCCAUCGUGCCUAGUCUCUUAUCCGAGCUCGACCCGCUUAUUCGUGCCGGGCCGGCCCAGGCCCGCAUAGAACCAGGUCGUGCCGAGCUUGGACCAGAC