ncRNA ID | novel_zma_miR2841 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr1:40116279-40116483 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089713 |
Length | 24 |
Mature sequence(if miRNA) | 182 - CUGUUCGAGUCUGGCCUGCAGCGG - 205 |
Stem-loop(if miRNA) |
--   -      UC    - U  AGC  GC   AA      -  A        UUUA       A  A     UUAA      UA  ----   AAACAGACCGUACCAG   CUG UUCGAG  UGGC C GC   GG  CUA  CGGGCC GG CCGGUCCG    GCACGAA AA UGGGU    CGGGCU  GA    GGU                G   ||| ||||||  |||| | ||   ||  |||  |||||| || ||||||||    ||||||| || |||||    ||||||  ||    |||                C   GAC AGGUUC  GCCG G UG   CC  GAU  GCCCGG CC GGCCGGGC    CGUGCUU UU GCCCA    GCUCGA  CU    UCU                U CA   C      GA    U C  -GA  AA   AC      A  C        ----       A  C     ----      GC  AUUC   GAUCCGUGCUACCCGA |
Stem-loop sequence | CUGUUCGAGUCUGGCCUGCAGCGGGCCUAAACGGGCCGGACCGGUCCGUUUAGCACGAAAAAAUGGGUUUAACGGGCUUAGAGGUAAACAGACCGUACCAGGCUAGCCCAUCGUGCCUAGUCUCUUAUCCGAGCUCGACCCGCUUAUUCGUGCCGGGCCGGCCCAGGCCCGCAUAGAACCAGGUCGUGCCGAGCUUGGACCAGAC |