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BaseInfo

ncRNA ID	novel_zma_miR2839
Species	Zea mays
Class	miRNA
Genome position	Chr5:52594353-52594450 [+]
Reference genome	RefGen_v4
Source	SRR1583944
Length	24
Mature sequence(if miRNA)	1 - ACCGUCACUAGAAAUCAUAUUUCU - 24
Stem-loop(if miRNA)	--ACC              U       G        CCUGAUU   A    CG      GUCACUAGAAAUCA AUUUCUG AGGCGGUU       UCU GUGG  A      |||||||||||||| ||||||| ||||||||       ||| ||||      CGGUGAUCUUUAGU UAAAGAU UCCGCCAA       AGA UACU  U UUUGA              -       G        -------   A    UU
Stem-loop sequence	ACCGUCACUAGAAAUCAUAUUUCUGGAGGCGGUUCCUGAUUUCUAGUGGCGAUUUUCAUAAGAAACCGCCUGUAGAAAUUGAUUUCUAGUGGCAGUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ235215.1	ncRNA:24   UCUUUAUACUAAAGAUCACUGCCA   1   |||||||||||||||||||*|||| targets:73   AGAAAUAUGAUUUCUAGUGUCGGU   96 Target Full Sequence	1.5	Sequence 1210 from Patent EP2985353	NA	coding protein	psRNATarget
JB163546.1	ncRNA:24   UCUUUAUACUAAAGAUCACUGCCA   1   |||||||||||||||||||*|||| targets:73   AGAAAUAUGAUUUCUAGUGUCGGU   96 Target Full Sequence	1.5	Sequence 1210 from Patent EP2559767	NA	coding protein	psRNATarget
HI403085.1	ncRNA:24   UCUUUAUACUAAAGAUCACUGCCA   1   |||||||||||||||||||*|||| targets:73   AGAAAUAUGAUUUCUAGUGUCGGU   96 Target Full Sequence	1.5	Sequence 1210 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235142.1	ncRNA:24   UCUUUAUACUAAAGAUCACUGCCA   1   |*|||*|||||||||||||=|||| targets:1   AUAAAAAUGAUUUCUAGUGGCGGU   24 Target Full Sequence	2.5	Sequence 1137 from Patent EP2985353	NA	coding protein	psRNATarget
JB163473.1	ncRNA:24   UCUUUAUACUAAAGAUCACUGCCA   1   |*|||*|||||||||||||=|||| targets:1   AUAAAAAUGAUUUCUAGUGGCGGU   24 Target Full Sequence	2.5	Sequence 1137 from Patent EP2559767	NA	coding protein	psRNATarget
HI403012.1	ncRNA:24   UCUUUAUACUAAAGAUCACUGCCA   1   |*|||*|||||||||||||=|||| targets:1   AUAAAAAUGAUUUCUAGUGGCGGU   24 Target Full Sequence	2.5	Sequence 1137 from Patent EP2074227	NA	coding protein	psRNATarget