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BaseInfo

ncRNA ID	novel_zma_miR2837
Species	Zea mays
Class	miRNA
Genome position	Chr1:70187494-70187632 [-]
Reference genome	RefGen_v4
Source	SRR2089713;SRR2287163
Length	24
Mature sequence(if miRNA)	1 - AGACGUUAGAUCUGAGAUGGAUAA - 24
Stem-loop(if miRNA)	--AC           A               C   G          UAAG      C    A  UGGUG     UCAUUUUAGAU UAACGUCUCUAGUUG UUG UGUAAUUUGC    GACAUC UCUA CG     G     ||||||||||| ||||||||||||||| ||| ||||||||||    |||||| |||| ||     G     GGUAGAGUCUA AUUGCAGAGAUCAAC AAU ACAUUAAAUG    UUGUAG AGGU GU     G AAUA           G               U   A          UUUA      A    G  GAUGU
Stem-loop sequence	ACUCAUUUUAGAUAUAACGUCUCUAGUUGCUUGGUGUAAUUUGCUAAGGACAUCCUCUAACGUGGUGGGGUGUAGUGGUGGAAGAUGUUAUUUGUAAAUUACAAUAAUCAACUAGAGACGUUAGAUCUGAGAUGGAUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020537789.1	ncRNA:24   AAUAGGUAGAGUCUAGAUUGCAGA   1   *|||||||=|||||||||||||*| targets:58   CUAUCCAUUUCAGAUCUAACGUGU   81 Target Full Sequence	2.5	PREDICTED: Zea mays Glycine-rich RNA-binding protein RZ1C (pco145034), transcript variant X1, mRNA	NA	coding protein	psRNATarget
JB163735.1	ncRNA:24   AAUAGGUAGAGUCUAGAUUGCAGA   1   *|||||||*|||||||||||||=| targets:14   CUAUCCAUAUCAGAUCUAACGUUU   37 Target Full Sequence	2.5	Sequence 1399 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235404.1	ncRNA:24   AAUAGGUAGAGUCUAGAUUGCAGA   1   *|||||||*|||||||||||||=| targets:14   CUAUCCAUAUCAGAUCUAACGUUU   37 Target Full Sequence	2.5	Sequence 1399 from Patent EP2985353	NA	coding protein	psRNATarget
HI403274.1	ncRNA:24   AAUAGGUAGAGUCUAGAUUGCAGA   1   *|||||||*|||||||||||||=| targets:14   CUAUCCAUAUCAGAUCUAACGUUU   37 Target Full Sequence	2.5	Sequence 1399 from Patent EP2074227	NA	coding protein	psRNATarget
EZ113957.1	ncRNA:24   AAUAGGUAGAGUCUAGAUUGCAGA   1   |**|||||||||||||||||*||| targets:229   UCUUCCAUCUCAGAUCUAACUUCU   252 Target Full Sequence	1.5	TSA: Zea mays contig49618, mRNA sequence	NA	coding protein	psRNATarget
EU948462.1	ncRNA:24   AAUAGGUAGAGUCUAGAUUGCAGA   1   *||*==||=|=||||||||||||| targets:437   AUACUUAUUUUAGAUCUAACGUCU   460 Target Full Sequence	3.0	Zea mays clone 377988 mRNA sequence	NA	coding protein	psRNATarget
BT016456.1	ncRNA:24   AAUAGGUAGAGUCUAGAUUGCAGA   1   |*|*||*|||=||||||||||||| targets:43   UCACCCUUCUUAGAUCUAACGUCU   66 Target Full Sequence	2.0	Zea mays clone Contig289 mRNA sequence	NA	coding protein	psRNATarget