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BaseInfo

ncRNA ID	novel_zma_miR2836
Species	Zea mays
Class	miRNA
Genome position	Chr5:4324780-4324840 [+]
Reference genome	RefGen_v4
Source	SRR1583944;SRR2647221;SRR2647385;SRR2647386;SRR2647387;SRR2647389;SRR2647390;SRR2647391;SRR2647467
Length	24
Mature sequence(if miRNA)	1 - GUCUACACUGUGCUCUUAAUAGUU - 24
Stem-loop(if miRNA)	--       C  U         AG    AU   GUCUACA UG GCUCUUAAU  UUAU  A   ||||||| || |||||||||  ||||  G   CAGAUGU AU UGAGAAUUA  GAUG  U AC       A  C         GA    AU
Stem-loop sequence	GUCUACACUGUGCUCUUAAUAGUUAUAUAGUUAGUAGAGAUUAAGAGUCUAAUGUAGACCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU942915.1	ncRNA:24   UUGAUAA--UUCUCGUGUCACAUCUG   1   ||--=||--||||||||||||||||| targets:906   AA--GUUGCAAGAGCACAGUGUAGAC   929 Target Full Sequence	2.5	Zea mays clone 1545248 mRNA sequence	NA	coding protein	psRNATarget
NM_001175931.1	ncRNA:24   UUGAUAA--UUCUCGUGUCACAUCUG   1   ||--=||--||||||||||||||||| targets:894   AA--GUUGCAAGAGCACAGUGUAGAC   917 Target Full Sequence	2.5	Zea mays uncharacterized LOC100383271 (LOC100383271), mRNA	NA	coding protein	psRNATarget
BT066747.1	ncRNA:24   UUGAUAA--UUCUCGUGUCACAUCUG   1   ||--=||--||||||||||||||||| targets:894   AA--GUUGCAAGAGCACAGUGUAGAC   917 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0059C04 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008674957.2	ncRNA:24   UUGAUAA--UUCUCGUGUCACAUCUG   1   ||--=||--||||||||||||||||| targets:2661   AA--GUUGCAAGAGCACAGUGUAGAC   2684 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100383271 (LOC100383271), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_020549901.1	ncRNA:24   UUGAUAA--UUCUCGUGUCACAUCUG   1   ||--=||--||||||||||||||||| targets:2683   AA--GUUGCAAGAGCACAGUGUAGAC   2706 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100383271 (LOC100383271), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_008674955.2	ncRNA:24   UUGAUAA--UUCUCGUGUCACAUCUG   1   ||--=||--||||||||||||||||| targets:2767   AA--GUUGCAAGAGCACAGUGUAGAC   2790 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100383271 (LOC100383271), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020549900.1	ncRNA:24   UUGAUAA--UUCUCGUGUCACAUCUG   1   ||--=||--||||||||||||||||| targets:2788   AA--GUUGCAAGAGCACAGUGUAGAC   2811 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100383271 (LOC100383271), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_008674954.2	ncRNA:24   UUGAUAA--UUCUCGUGUCACAUCUG   1   ||--=||--||||||||||||||||| targets:2817   AA--GUUGCAAGAGCACAGUGUAGAC   2840 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100383271 (LOC100383271), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008674956.2	ncRNA:24   UUGAUAA--UUCUCGUGUCACAUCUG   1   ||--=||--||||||||||||||||| targets:2839   AA--GUUGCAAGAGCACAGUGUAGAC   2862 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100383271 (LOC100383271), transcript variant X3, mRNA	NA	coding protein	psRNATarget