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BaseInfo

ncRNA ID	novel_zma_miR2835
Species	Zea mays
Class	miRNA
Genome position	Chr1:144404431-144404558 [-]
Reference genome	RefGen_v4
Source	SRR2089713;SRR4237220
Length	21
Mature sequence(if miRNA)	1 - CUUAAAUUAAGUUUGUGGGCC - 21
Stem-loop(if miRNA)	--U    GG G  -U                     A       ---A         ------UG   C    UCAU  G UU  UUUAAGAACGUGGGUACCCAC UUUUUAA    UUAAGUUCG        GGC C    ||||  | ||  ||||||||||||||||||||| |||||||    |||||||||        |||    GGUG  U AA  AAAUUCUUGCACCCAUGGGUG AAGGAUU    AAUUCAAGC        CCG U CCG    UU G  UU                     C       AUCC         UGUCAAAA   A
Stem-loop sequence	UUCAUGGGGUUUUUUAAGAACGUGGGUACCCACAUUUUUAAAUUAAGUUCGUGGGCCCUAGCCAAAACUGUCGAACUUAACCUAUUAGGAACGUGGGUACCCACGUUCUUAAAUUAAGUUUGUGGGCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT066569.2	ncRNA:21   CCGGGUGUUUGAAUUAAAUUC   1   |||||||==|||||||||||| targets:2004   GGCCCACGGACUUAAUUUAAG   2024 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0031A06 mRNA, complete cds	NA	coding protein	psRNATarget
BT055929.2	ncRNA:21   CCGGGUGUUUGAAUUAAAUUC   1   |||||||==|||||||||||| targets:1988   GGCCCACGGACUUAAUUUAAG   2008 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0045N06 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008666676.2	ncRNA:21   CCGGGUGUUUGAAUUAAAUUC   1   |||||||==|||||||||||| targets:745   GGCCCACGGACUUAAUUUAAG   765 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103643487 (LOC103643487), mRNA	NA	coding protein	psRNATarget