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BaseInfo

ncRNA ID	novel_zma_miR2833
Species	Zea mays
Class	miRNA
Genome position	Chr1:187709087-187709266 [-]
Reference genome	RefGen_v4
Source	SRR2089713
Length	21
Mature sequence(if miRNA)	1 - CCAGUUAUGGAUUGGUUUGGG - 21
Stem-loop(if miRNA)	--                               A    A   A      C  C                      A   -- UAAAUUUACA   CAAAUCAAUCCAUAACUGGGUGGAAACCCAU GAAA UCC UGGGUU AG UUGUUAAGGUAGCAGCAUACAC GUG  A          G   ||||||||||||||||||||||||||||||| |||| ||| |||||| || |||||||||||||||||||||| |||  |   GUUUGGUUAGGUAUUGACCCACCUUUGGGUA CUUU GGG GCUCAA UC AAUAAUUUCGUCGUCGUAUGUG CCA  G          G GG                               C    -   A      A  U                      -   CU UAACUUCGAU
Stem-loop sequence	CAAAUCAAUCCAUAACUGGGUGGAAACCCAUAGAAAAUCCAUGGGUUCAGCUUGUUAAGGUAGCAGCAUACACAGUGAUAAAUUUACAGGUAGCUUCAAUGUCACCGUGUAUGCUGCUGCUUUAAUAAUCUAAACUCGAGGGUUUCCAUGGGUUUCCACCCAGUUAUGGAUUGGUUUGGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008675165.2	ncRNA:21   GGGUUUGGUUAGGUAUUGACC   1   ||||||||||||||||||||| targets:913   CCCAAACCAAUCCAUAACUGG   933 Target Full Sequence	0.0	PREDICTED: Zea mays Calmodulin-7 (LOC100502442), transcript variant X2, mRNA	NA	coding protein	psRNATarget
EZ092439.1	ncRNA:21   GGGUUUGGUUAGGUAUUGACC   1   *=|||||*||||||||||||* targets:10   GUCAAACGAAUCCAUAACUGC   30 Target Full Sequence	2.0	TSA: Zea mays contig28088, mRNA sequence	NA	coding protein	psRNATarget
XM_008667019.2	ncRNA:21   GGGUUUGGUUAGGUAUUGACC   1   *=|||||*||||||||||||* targets:700   GUCAAACGAAUCCAUAACUGC   720 Target Full Sequence	2.0	PREDICTED: Zea mays pescadillo homolog (LOC103643851), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008667018.2	ncRNA:21   GGGUUUGGUUAGGUAUUGACC   1   *=|||||*||||||||||||* targets:700   GUCAAACGAAUCCAUAACUGC   720 Target Full Sequence	2.0	PREDICTED: Zea mays pescadillo homolog (LOC103643851), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT062075.1	ncRNA:21   GGGUUUGGUUAGGUAUUGACC   1   *=|||||*||||||||||||* targets:487   GUCAAACGAAUCCAUAACUGC   507 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0212O21 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001153425.2	ncRNA:21   GGGUUUGGUUAGGUAUUGACC   1   *=|||||*||||||||||||* targets:514   GUCAAACGAAUCCAUAACUGC   534 Target Full Sequence	2.0	Zea mays uncharacterized LOC100280505 (pco136431), mRNA	NA	coding protein	psRNATarget
EU952160.1	ncRNA:21   GGGUUUGGUUAGGUAUUGACC   1   *=|||||*||||||||||||* targets:515   GUCAAACGAAUCCAUAACUGC   535 Target Full Sequence	2.0	Zea mays clone 1213799 pescadillo mRNA, complete cds	NA	coding protein	psRNATarget