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BaseInfo

ncRNA ID ath-miRf10036-npr
Species Arabidopsis thaliana
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - ACUUGACCUCUAGGUCGAGUG - NA
Stem-loop(if miRNA)   UG  G                      GA G --  -   AGUGAUGGUCAGAAGAUGGAGAUGAAGUCACUCGACCUGGGGGUCGAGUGAGGUGAUCGAGUGGUGGUCAAGAGAUGGAGAUG
GA  AA UCACUCGACCUGGGGGUCAAGU  U U  GA UCG                                                                                   A
||  || ||||||||||||||||||||||  | |  || |||                                                                                   A
CU  UU GGUGAGCUGGAUCUCCAGUUCA  U C  CG AGU                                                                                   G
  GU  -                      -- - CU  A   UCUAGAGUUCUCUGGUGAGCUGGGGGUCCAGCUCAUCUUCUGUGGUGGUGAGAUAGUGUAGUGAGCUGGGGGUUCAGCUCAAA
Stem-loop sequence GAUGAAGUCACUCGACCUGGGGGUCAAGUGAUGUGAUCGAGUGAUGGUCAGAAGAUGGAGAUGAAGUCACUCGACCUGGGGGUCGAGUGAGGUGAUCGAGUGGUGGUCAAGAGAUGGAGAUGAAGAAACUCGACUUGGGGGUCGAGUGAUGUGAUAGAGUGGUGGUGUCUUCUACUCGACCUGGGGGUCGAGUGGUCUCUUGAGAUCUUGAAGCUCCUACUUGACCUCUAGGUCGAGUGGUUUGUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AY227642.1
ncRNA:21   GUGAGCUGGAUCUCCAGUUCA   1
  |||||*|||||||||||=|||
targets:927   CACUCUACCUAGAGGUCGAGU   947

2.5 Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds NA coding protein psRNATarget
NM_001342712.1
ncRNA:21   GUGAGCUGGAUCUCCAGUUCA   1
  *||||*|*||||||||||||*
targets:479   AACUCAAACUAGAGGUCAAGA   499

3.0 Arabidopsis thaliana MATH domain/coiled-coil protein mRNA MATH domain/coiled-coil protein(AT5G03550) coding protein psRNATarget