ncRNA ID | ath-miRf10036-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 21 |
Mature sequence(if miRNA) | NA - ACUUGACCUCUAGGUCGAGUG - NA |
Stem-loop(if miRNA) |
  UG  G                      GA G --  -   AGUGAUGGUCAGAAGAUGGAGAUGAAGUCACUCGACCUGGGGGUCGAGUGAGGUGAUCGAGUGGUGGUCAAGAGAUGGAGAUG GA  AA UCACUCGACCUGGGGGUCAAGU  U U  GA UCG                                                                                   A ||  || ||||||||||||||||||||||  | |  || |||                                                                                   A CU  UU GGUGAGCUGGAUCUCCAGUUCA  U C  CG AGU                                                                                   G   GU  -                      -- - CU  A   UCUAGAGUUCUCUGGUGAGCUGGGGGUCCAGCUCAUCUUCUGUGGUGGUGAGAUAGUGUAGUGAGCUGGGGGUUCAGCUCAAA |
Stem-loop sequence | GAUGAAGUCACUCGACCUGGGGGUCAAGUGAUGUGAUCGAGUGAUGGUCAGAAGAUGGAGAUGAAGUCACUCGACCUGGGGGUCGAGUGAGGUGAUCGAGUGGUGGUCAAGAGAUGGAGAUGAAGAAACUCGACUUGGGGGUCGAGUGAUGUGAUAGAGUGGUGGUGUCUUCUACUCGACCUGGGGGUCGAGUGGUCUCUUGAGAUCUUGAAGCUCCUACUUGACCUCUAGGUCGAGUGGUUUGUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AY227642.1 |
|
2.5 | Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
NM_001342712.1 |
|
3.0 | Arabidopsis thaliana MATH domain/coiled-coil protein mRNA | MATH domain/coiled-coil protein(AT5G03550) | coding protein | psRNATarget |