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BaseInfo

ncRNA ID novel_zma_miR2820
Species Zea mays
Class miRNA
Genome position Chr1:290893987-290894194 [-]
Reference genome RefGen_v4
Source SRR2089713
Length 24
Mature sequence(if miRNA) 185 - ACUGUUAUUUUCGGCGGCUAAGGG - 208
Stem-loop(if miRNA) --   G   -             A   G            U   CUGCU      -  AC   C  A  CUGCCGCCGAAAAUAACACUAUUUUUGGCGGCUUCUGACA
  ACU UUA UUUUCGGCGGCUA GGG UGGCCGCCGAAA UAA     UAUUUU CG  GGC UG CA                                        C
  ||| ||| ||||||||||||| ||| |||||||||||| |||     |||||| ||  ||| || ||
  UGA AAU AAAAGCCGCCGGU CCC AUCGGCGGUUUU AUU     UACAAU GA  AGC AC CG                                        A
UU   G   U             -   G            U   ----A      U  --   C  -  ACACAGUCCCCGGUAGCUUUUAUUGUAAUAAAAGCCACCG
Stem-loop sequence ACUGUUAUUUUCGGCGGCUAAGGGGUGGCCGCCGAAAUUAACUGCUUAUUUUCGACGGCCUGACACUGCCGCCGAAAAUAACACUAUUUUUGGCGGCUUCUGACACAGCCACCGAAAAUAAUGUUAUUUUCGAUGGCCCCUGACACAGCCACCGAAGUUAACAUAUUAUUUUUGGCGGCUAGCCCUGGCCGCCGAAAAUUAAGAGUUU