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BaseInfo

ncRNA ID	novel_zma_miR2818
Species	Zea mays
Class	miRNA
Genome position	Chr1:302539929-302540091 [-]
Reference genome	RefGen_v4
Source	SRR2089713;SRR5105959;SRR1583942
Length	21
Mature sequence(if miRNA)	1 - CACGUCGGCAUCCGGUUUGAG - 21
Stem-loop(if miRNA)	--                   A A             U     -----------GA    U   ACU     UG  G   --CAC    A   CAAACCGGAUGCCGAUGUG C UGCCACGUUGGAG CACUU             GUCC CGA   UGGCA  AU UGU     UUGG U   ||||||||||||||||||| | ||||||||||||| |||||             |||| |||   |||||  || |||     ||||   GUUUGGCCUACGGCUGCAC G AUGGUGUAACCUC GUGAG             CAGG GUU   ACUGU  UG ACG     AACU C GA                   C C             -     AUUAUUCAAGUCC    -   --C     GU  G   AUUCA    C
Stem-loop sequence	CAAACCGGAUGCCGAUGUGACAUGCCACGUUGGAGUCACUUGAGUCCUCGAACUUGGCAUGAUGUGUCACUUGGAUCCUCAAACUUAGCAGGUUGUGUCACUUGGGACCCUGAACUUAUUAGAGUGCUCCAAUGUGGUACGCCACGUCGGCAUCCGGUUUGAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB163742.1	ncRNA:21   GAGUUUGGCCUACGGCUGCAC   1   |||||||||||||||||=||| targets:48   CUCAAACCGGAUGCCGAUGUG   68 Target Full Sequence	1.5	Sequence 1406 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235411.1	ncRNA:21   GAGUUUGGCCUACGGCUGCAC   1   |||||||||||||||||=||| targets:48   CUCAAACCGGAUGCCGAUGUG   68 Target Full Sequence	1.5	Sequence 1406 from Patent EP2985353	NA	coding protein	psRNATarget
HI403281.1	ncRNA:21   GAGUUUGGCCUACGGCUGCAC   1   |||||||||||||||||=||| targets:48   CUCAAACCGGAUGCCGAUGUG   68 Target Full Sequence	1.5	Sequence 1406 from Patent EP2074227	NA	coding protein	psRNATarget