Search result

BaseInfo

ncRNA ID novel_zma_miR2816
Species Zea mays
Class miRNA
Genome position Chr6:173648829-173649016 [+]
Reference genome RefGen_v4
Source SRR1583941
Length 22
Mature sequence(if miRNA) 167 - AAAUGAUGUGGCAUAUUGACGU - 188
Stem-loop(if miRNA) --A     U         U         U        A                   -----------CA  -  CGUCUUCAUCGACUAGCCCAAUGUG
   UCAAU UGCCACAUC UUUCUCAAA UAAAAUAA GGCCAUGGAAAAUUUAGCC             AU GA                         C
   ||||| ||||||||| ||||||||| |||||||| |||||||||||||||||||             || ||
   AGUUA ACGGUGUAG AAAGAGUUU AUUUUGUU CUGGUACCUUUUAAAUCGG             CU GU                         C
UGC     U         U         U        A                   UUUAACUCACUCU  U  CAGGUUUGUAUGCAAUUCCAACAUU
Stem-loop sequence AUCAAUUUGCCACAUCUUUUCUCAAAUUAAAAUAAAGGCCAUGGAAAAUUUAGCCCAAUGACGUCUUCAUCGACUAGCCCAAUGUGCCUUACAACCUUAACGUAUGUUUGGACUGUUCUCUCACUCAAUUUGGCUAAAUUUUCCAUGGUCAUUGUUUUAUUUUGAGAAAUGAUGUGGCAUAUUGACGU