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BaseInfo

ncRNA ID	novel_zma_miR2815
Species	Zea mays
Class	miRNA
Genome position	Chr1:34820533-34820601 [+]
Reference genome	RefGen_v4
Source	SRR1583941
Length	21
Mature sequence(if miRNA)	49 - UGGAGAUGCUCAACUAGUGUG - 69
Stem-loop(if miRNA)	--       G     U     -----A    U   G     CACUAGU UGAGU AUUUU      GCCA GGU GCG   ||||||| ||||| |||||      |||| ||| ||A   GUGAUCA ACUCG UAGAG      UGGU UCG UGU GU       -     -     GUAUAG    -   G
Stem-loop sequence	CACUAGUGUGAGUUAUUUUAGCCAUGGUGGCGAUGUGGCUUGGUGAUAUGGAGAUGCUCAACUAGUGUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008672439.2	ncRNA:21   GUGUGAUCAACUCGUAGAGGU   1   ||*=||*|||||||||||||| targets:969   CAGGCUCGUUGAGCAUCUCCA   989 Target Full Sequence	3.0	PREDICTED: Zea mays uncharacterized LOC103647937 (LOC103647937), mRNA	NA	coding protein	psRNATarget
BT040782.1	ncRNA:21   GUGUGAUCAACUCGUAGAGGU   1   *|||||**||||||||||||| targets:952   GACACUUUUUGAGCAUCUCCA   972 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFc0128G08 mRNA, complete cds	NA	coding protein	psRNATarget
BT063228.1	ncRNA:21   GUGUGAUCAACUCGUAGAGGU   1   *|||||**||||||||||||| targets:1037   GACACUUUUUGAGCAUCUCCA   1057 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFc0040J15 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008669117.2	ncRNA:21   GUGUGAUCAACUCGUAGAGGU   1   *|||||**||||||||||||| targets:1120   GACACUUUUUGAGCAUCUCCA   1140 Target Full Sequence	2.0	PREDICTED: Zea mays putative leucine-rich repeat transmembrane protein kinase family protein (LOC100191492), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008669069.2	ncRNA:21   GUGUGAUCAACUCGUAGAGGU   1   *|||||**||||||||||||| targets:1133   GACACUUUUUGAGCAUCUCCA   1153 Target Full Sequence	2.0	PREDICTED: Zea mays putative leucine-rich repeat transmembrane protein kinase family protein (LOC100191492), transcript variant X2, mRNA	NA	coding protein	psRNATarget
BT033589.1	ncRNA:21   GUGUGAUCAACUCGUAGAGGU   1   *|||||**||||||||||||| targets:1174   GACACUUUUUGAGCAUCUCCA   1194 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0234P18 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001136924.1	ncRNA:21   GUGUGAUCAACUCGUAGAGGU   1   *|||||**||||||||||||| targets:1174   GACACUUUUUGAGCAUCUCCA   1194 Target Full Sequence	2.0	Zea mays putative leucine-rich repeat transmembrane protein kinase family protein (LOC100191492), mRNA	NA	coding protein	psRNATarget
XM_008669028.2	ncRNA:21   GUGUGAUCAACUCGUAGAGGU   1   *|||||**||||||||||||| targets:1129   GACACUUUUUGAGCAUCUCCA   1149 Target Full Sequence	2.0	PREDICTED: Zea mays putative leucine-rich repeat transmembrane protein kinase family protein (LOC100191492), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EU956876.1	ncRNA:21   GUGUGAUCAACUCGUAGAGGU   1   *|||||**||||||||||||| targets:1133   GACACUUUUUGAGCAUCUCCA   1153 Target Full Sequence	2.0	Zea mays clone 1576347 ATP binding protein mRNA, complete cds	NA	coding protein	psRNATarget