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BaseInfo

ncRNA ID	novel_zma_miR2812
Species	Zea mays
Class	miRNA
Genome position	Chr5:25041263-25041339 [-]
Reference genome	RefGen_v4
Source	SRR1583944;SRR2647389
Length	23
Mature sequence(if miRNA)	1 - UUAGGAGUCUUGGGGGUACCCCA - 23
Stem-loop(if miRNA)	--AAU   G    UC         C      U    AUGG      UAC CCCA  AGGCUUUUG AGCUUG GCUG    U      ||| ||||  ||||||||| |||||| ||||    G      AUG GGGU  UCUGAGGAU UUGAGC CGAC    A ACCCC   G    --         -      -    CAUU
Stem-loop sequence	AAUUACGCCCAUCAGGCUUUUGCAGCUUGUGCUGAUGGUGAUUACCAGCCGAGUUUAGGAGUCUUGGGGGUACCCCA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU962648.1	ncRNA:23   ACCCCAUGGGGGUUCUGAGGAUU   1   *|||||||||||||||||||||| targets:1185   AGGGGUACCCCCAAGACUCCUAA   1207 Target Full Sequence	0.0	Zea mays clone 244452 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
EU940899.1	ncRNA:23   ACCCCAUGGGGGUUCUGAGGAUU   1   *|||||||||||||||||||||| targets:572   AGGGGUACCCCCAAGACUCCUAA   594 Target Full Sequence	0.0	Zea mays clone 1168123 mRNA sequence	NA	coding protein	psRNATarget
XM_020541624.1	ncRNA:23   ACCCCAUGGGGGUUCUGAGGAUU   1   *|||||||||||||||||||||| targets:566   AGGGGUACCCCCAAGACUCCUAA   588 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC103644648 (LOC103644648), mRNA	NA	coding protein	psRNATarget
XM_020541001.1	ncRNA:23   ACCCCAUGGGGGUUCUGAGGAUU   1   **|||||||||=||||||||||| targets:4666   AAGGGUACCCCUAAGACUCCUAA   4688 Target Full Sequence	1.5	PREDICTED: Zea mays plasma membrane ATPase 2-like (LOC103632998), transcript variant X36, mRNA	NA	coding protein	psRNATarget
EU940901.1	ncRNA:23   ACCCCAUGGGGGUUCUGAGGAUU   1   *|||||||||||||*|||||||| targets:272   AGGGGUACCCCCAAUACUCCUAA   294 Target Full Sequence	1.5	Zea mays clone 1168199 mRNA sequence	NA	coding protein	psRNATarget