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BaseInfo

ncRNA ID novel_zma_miR2805
Species Zea mays
Class miRNA
Genome position Chr5:34516982-34517035 [-]
Reference genome RefGen_v4
Source SRR1583944
Length 24
Mature sequence(if miRNA) 1 - AGCCGACGGGAGUUAUCUAAUUCC - 24
Stem-loop(if miRNA) --     AA    GG          G U
  AAUUA  GUAA  CCCGUCGGCU C U
  |||||  ||||  |||||||||| |
  UUAAU  UAUU  GGGCAGCCGA G U
CC     -C    GA          - U
Stem-loop sequence AAUUAAAGUAAGGCCCGUCGGCUGCUUUUGAGCCGACGGGAGUUAUCUAAUUCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008682205.1
ncRNA:24   CCUUAAUCUAUUGAGGGCAGCCGA   1
  *|=||||*=||||||||||||||*
targets:2   UGGAUUAUGUAACUCCCGUCGGCC   25

3.0 PREDICTED: Zea mays proline-rich receptor-like protein kinase PERK2 (LOC103655449), mRNA NA coding protein psRNATarget