ncRNA ID | novel_zma_miR2802 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr9:85432430-85432634 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089713;SRR5451004 |
Length | 24 |
Mature sequence(if miRNA) | 182 - UUCUCUGUAGAUAUUAUGAGGCAU - 205 |
Stem-loop(if miRNA) |
--    -            -U  C    GAAA      U  GAAA   -----AA AAAAGCAAAUACCGAACUUGUCAAGUGAUUCAGGGGCACCUACAGGGUUGU   GCUU GUAAUGUCUGCG  GA GGGU    CGCUCU GG    AGU       G                                                   C   |||| ||||||||||||  || ||||    |||||| ||    |||       |                                                   U   CGGA UAUUAUAGAUGU  CU CCCG    GCGAGG CU    UCG       C                                                   G UA    G            CU  U    --AA      -  AUGA   ACACUAC UUGGAGGAUUCAUUAAUCCGGGUGGAUGUCAACAGGAACAGGUUGCCUGGA |
Stem-loop sequence | GCUUGUAAUGUCUGCGUGACGGGUGAAACGCUCUUGGGAAAAGUAAGAAAAGCAAAUACCGAACUUGUCAAGUGAUUCAGGGGCACCUACAGGGUUGUCUGAGGUCCGUUGGACAAGGACAACUGUAGGUGGGCCUAAUUACUUAGGAGGUUCCAUCACAGCUAGUAUCGGAGCGAAGCCCUUCUCUGUAGAUAUUAUGAGGCAU |