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BaseInfo

ncRNA ID novel_zma_miR2793
Species Zea mays
Class miRNA
Genome position Chr10:71206129-71206214 [+]
Reference genome RefGen_v4
Source SRR1583944
Length 24
Mature sequence(if miRNA) 1 - GAAACCGCCAGUGAAAAUAGCAUU - 24
Stem-loop(if miRNA) --G            A                         AU
   AAACCGCCAGUG AAAUAGCAUUUCCAUUGGCGGUUUU  U
   |||||||||||| |||||||||||||||||||||||||
   UUUGGCGGUCAC UUUAUUGUAAAGGUGACCGCCAAAA  A
UUG            C                         GA
Stem-loop sequence GAAACCGCCAGUGAAAAUAGCAUUUCCAUUGGCGGUUUUAUUAAGAAAACCGCCAGUGGAAAUGUUAUUUCCACUGGCGGUUUGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU950653.1
ncRNA:24   UUACGAUAAAAGUGACCGCCAAAG   1
  |||||||||||||||||||||||=
targets:4   AAUGCUAUUUUCACUGGCGGUUUU   27

1.0 Zea mays clone 506422 mRNA sequence NA coding protein psRNATarget
EU950653.1
ncRNA:24   UUACGAUAAAAGUGACCGCCAAAG   1
  ||||||||||*||||||||||||*
targets:49   AAUGCUAUUUCCACUGGCGGUUUG   72

2.0 Zea mays clone 506422 mRNA sequence NA coding protein psRNATarget
EZ101180.1
ncRNA:24   UUACGAUAAAAGUGACCGCCAAAG   1
  *||*||||||||||||||||||*=
targets:96   UAUCCUAUUUUCACUGGCGGUUGU   119

2.5 TSA: Zea mays contig36836, mRNA sequence NA coding protein psRNATarget