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BaseInfo

ncRNA ID	novel_zma_miR2778
Species	Zea mays
Class	miRNA
Genome position	Chr8:34817931-34818045 [+]
Reference genome	RefGen_v4
Source	SRR2089713;SRR2089700
Length	24
Mature sequence(if miRNA)	1 - CUGGUAUGCGAGUGGAGGUGGGGU - 24
Stem-loop(if miRNA)	-- UG  A      U     U           G    AA    AA   --  UG    A   C  GU UGCGAG GGAGG GGGGUUUUGCU CAUG  GUCG  GCU  GC  CGUU G   |  || |||||| ||||| ||||||||||| ||||  ||||  |||  ||  ||||   G  UA GUGCUU CUUCC CUCCAAAGCGG GUAC  UAGC  CGG  CG  GUAG G UA GU  G      -     C           A    AG    AA   CU  GU    G
Stem-loop sequence	CUGGUAUGCGAGUGGAGGUGGGGUUUUGCUGCAUGAAGUCGAAGCUGCUGCGUUAGGGGAUGUGGCUCGGCAACGAUGACAUGAGGCGAAACCUCCCCUUCUUCGUGGAUUGGAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT070173.2	ncRNA:24   UGGGGUGGAGGUGAGCGUAUGGUC   1   *||||||||||||||||||||||| targets:517   CCCCCACCUCCACUCGCAUACCAG   540 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFc0151L06 mRNA, complete cds	NA	coding protein	psRNATarget
BT055256.2	ncRNA:24   UGGGGUGGAGGUGAGCGUAUGGUC   1   *||||||||||||||||||||||| targets:305   CCCCCACCUCCACUCGCAUACCAG   328 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFc0058D06 mRNA, complete cds	NA	coding protein	psRNATarget
BT066883.2	ncRNA:24   UGGGGUGGAGGUGAGCGUAUGGUC   1   *||||||||||||||||||||||| targets:517   CCCCCACCUCCACUCGCAUACCAG   540 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0090O12 mRNA, complete cds	NA	coding protein	psRNATarget
BT088130.2	ncRNA:24   UGGGGUGGAGGUGAGCGUAUGGUC   1   =||||||||=|||*|||||||||| targets:432   GCCCCACCUUCACACGCAUACCAG   455 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0029O11 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020546594.1	ncRNA:24   UGGGGUGGAGGUGAGCGUAUGGUC   1   =||||||||=|||*|||||||||| targets:500   GCCCCACCUUCACACGCAUACCAG   523 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100502429 (LOC100502429), mRNA	NA	coding protein	psRNATarget