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BaseInfo

ncRNA ID novel_zma_miR2777
Species Zea mays
Class miRNA
Genome position Chr5:66745068-66745150 [-]
Reference genome RefGen_v4
Source SRR1583944;SRR1583942
Length 22
Mature sequence(if miRNA) 1 - UCUAGAUGCAUGCUUAAUGGCC - 22
Stem-loop(if miRNA) --  U     G       -    -   AAA    A   A  UG
  CU UUAAG GUGUAUU AGAC GGC   CUUU UUU GU  A
  || ||||| ||||||| |||| |||   |||| ||| ||  U
  GG AAUUC UACGUAG UCUG CCG   GAAG AAA CG  U
CC  U     G       A    G   -GA    A   -  UU
Stem-loop sequence CUUUUAAGGGUGUAUUAGACGGCAAACUUUAUUUAGUUGAUUUUGCAAAAGAAGAGGCCGGUCUAGAUGCAUGCUUAAUGGCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
X98279.1
ncRNA:22   CCGGUAAUUCGUA-CGUAGAUCU   1
  *||||||||||||-|||||||||
targets:430   AGCCAUUAAGCAUAGCAUCUAGA   452

3.0 Z.mays high copy dispersed repeat DNA, ZHCR4 NA coding protein psRNATarget