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BaseInfo

ncRNA ID novel_zma_miR2774
Species Zea mays
Class miRNA
Genome position Chr8:35007629-35007687 [-]
Reference genome RefGen_v4
Source SRR2089713;SRR1997865
Length 23
Mature sequence(if miRNA) 37 - GGAAACGAUUUGCACUGACGGUU - 59
Stem-loop(if miRNA) --     -      G     A     UUAU
  GGAAA CGAUUU CACUG CGGUU    U
  ||||| |||||| ||||| |||||
  CUUUU GCUAAA GUGGC GCCAG    A
CA     A      A     C     CCGC
Stem-loop sequence GGAAACGAUUUGCACUGACGGUUUUAUUACGCCGACCGCCGGUGAAAAUCGAUUUUCAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU960305.1
ncRNA:23   UUGGCAGUCACGUUUAGCAAAGG   1
  |||||*|||||||||||||||||
targets:707   AACCGCCAGUGCAAAUCGUUUCC   729

1.0 Zea mays clone 223391 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
NM_001150001.1
ncRNA:23   UUGGCAGUCACGUUUAGCAAAGG   1
  |||||*|||||||||||||||||
targets:707   AACCGCCAGUGCAAAUCGUUUCC   729

1.0 Zea mays uncharacterized LOC100276144 (LOC100276144), mRNA NA coding protein psRNATarget
EU954222.1
ncRNA:23   UUGGCAGUCACGUUUAGCAAAGG   1
  |||||*|||||||||||||||||
targets:881   AACCGCCAGUGCAAAUCGUUUCC   903

1.0 Zea mays clone 1458779 hemolysin-III related family protein mRNA, complete cds NA coding protein psRNATarget
EU944461.1
ncRNA:23   UUGGCAGUCACGUUUAGCAAAGG   1
  |||||*|||||*|||||||||||
targets:905   AACCGCCAGUGAAAAUCGUUUCC   927

2.5 Zea mays clone 219441 mRNA sequence NA coding protein psRNATarget